Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02190 ATGTTGATGTGTGACAATTCTATGGTTATACATAGCAAGATTGGGGTTCAGGTAGGTGTCTTTGGAAGGAGGACTTCTGTTGGTTGTGGCATGCTTTCACAAGATATGTCTTCTCCCCTTTCCACTACCAAGTCCAAAGCTTCAAATGTTTGGCACTTCCTTCCTGCACTCATATTCTTTTTTTCCTTCATTTCATTTGGGGCTGTGGGCACCAACAATGACAAAGTTGTATCCATTGGTGTAATCATTGACCTTAAATCTCGAGTTGGGAAAGAAGAGAAAGTAGCTATTGAGATTGCAGCTCAAAATTACAACAACAGTTCAAAGTACCACAAGCTGTCTCTGCATTTCAAGGACTCTGGAGGGGTCGCTCTAAGAGCAATTTCTATCGCTGAAGAGATGATTAAAATTAAGAAAGTGCAATTGTTAATTGGCATGCACTCATGGCCGGAAGCAGTTCTAGTAACTGAGGTTGGGAATCAAGCTCAAGTTCCTGTTATTTCATTTGCTTCACCGGTCACCACCCTACCATTGTCATCATTTCATTGGCCTTTCTTGGTACTAATGACTAATAATCGTACTGCATATGTAAAATGCATTTCTGATATAGTTCTTATATACAATTGGCAAAGAGTTATAGTGATCTATGAAGAGGATGCATATGGTAGTGATCATGGGACGTTAGCACTTCTATCTGAGGCACTCCAAAATGTTGGTTCGCAGATTGAGTTCTCTCTGGCTCTCCCTCCATATTCTTCTTTGTCTCATCCAGGTGGGATGGTTCAAATAGAGTTGCTGAAGCTGGTTAACACTCAATCTCGTGTCTTCATAGTTCTACAATCATCACTACCTATGGTAACTTGTTTGTTTGCTGAAGCTAAAAAGATGGCACTTGTGGATATGGAAACAGCTTGGGTAGTTCCAGAAAGCATAACTTATACGCTAGACTCTGTTAGTGACACTGTCATTTCATCCATGGAAGGTGTTTTGGGGATCAAGACTTATTACTTGCAAAATGATACTGATTACCAGAGTTTCCAGGTCCAATTCAGGAAAAGCTTTCAAAAAGAAAATCCAGAAGAAGAAAACCCCCGCCCAGGATTTTATGCACTGCAAGCATATGATAGCATTAGAGTTGTTACACATGCCATGGAGACATTGAAAAATGATGACAGTAGCACTAATATATTTCTAAAAGAAATGTTGTCTTGCAATTTCCTTGGTTTAAGTGGAAAAATAAAATTTGAACATGGGCAGACCTTGCCCTCTCCTATATTAAGGATTGTAAATGTCATTGGAAAGGGTTACAAAGAAATAGACTTTTGGACAGAAAAGTATGGATTCTCCAAGACCCTTTCCTTTGAATTAGCAGGTCAGGAAGTTAAGACTAATGAGGACACCACCAGTACAATAGAAGGTTTGGGAGGTCCCATAATTTGGCCTGGGAATTTAATGAGGACTCCAAAGGGTTGGAGAATGCCTACTAGAGCAAAACCAATGAAAATTGGTGTTCCAAGAAGGGCTCCATTTGAGAAGTTTGTGAAGGTCGATTACAATGAAAACTCAAATCAAACCCAGTATAGTGGATTCTGCATTGAAATTTTTGAAAAGGTTCTAGATCTGTTGCAGTATGATCTACCATATGAAATAGTTCCCTCTAATGGAACCTATGCTGATCTGGTTTCTCTTGTCTACAACAAGACTTTTGACGCTGTTGTTGGTGACATAACCATTTTGGCGGACAGAATGCAATACGTGGATTTTACACTGCCATATACAGAGTCAGGATTGTCAATGATAGTTCCAGAAAAAACTGAGCCTACAACTCTAATTTTTATGAAGCCCTTTACCTGGGAAATGTGGATGGTTACAGTTTCCATCCTCATCTACACCATGTTCGCAGTTTGGTACTTGGAGCGGGATTCCAATCCAGAATTCAGTGGTCCATGGAAGACTCAGATCAGCGTTGCTTTATGGTTTACCGTCTTTGCTCTATTCTGTGCCCACAGGGAGAAAATCTATAGCAACTTTACTCAAATGGTGATTGTTGTGTGGCTCTTCCTTTGTTTGATCCTAACCTCAAGCTACACAGCTAATCTATCCTCAATGCTCACAGTTCAACAATTGCAACCAAGTAAAAACATTGAGTCACTTAAATGGAGCAACTCCAAAATCGGGTTCTCAGGTGCTACATATGTGAGAAAATATCTGGAAAACGTGCTTCATTTCAAATCGCAGAATCTTATCGAAGTCAGCTGGGACTCCATCTACACTAAGGAGTTTGAAAGCAAGCGCATAGCAGCTGCCTTTATTGAAATCCCCTATGAAAAGGTATTCATCAGCAAGAACTGCCGGGGATACTCTGCCTTCACACCTACCTACAGATTTGGAGGGCTAGGCTTTATGTTCCAGAAAGGTTCTCCAATTACCAGAGACTTTTCCAAAGCTATATTGCAGCTCTCAGAGAATGGAGACATGAAGTCACTAGAAGATAAATGGCTGAACAACCCAGATGAATGTTCAACCAATATAACTACCAATGCTAATGGAAGTTTAAAACTTCAAAGCTTCTGGGTTCTTTTTGCTACTTCTGTTTTCACATCTACCTTTTGTGTGACAATATCCACTCTACTCTCGATGAAAAATAAACAGCAACAAGAGGCAGTTGAAAGCGATCGTGCCTGTTCAGCTATTAAGACTGTTTGGAAGAAGGTGCTCACTCTAGCTAACTATATATACAATGCAGAAAACACCAATCAAAGGCAAGTCCCAAATGCAGCTCATATAGAGGGTGTTGAAGATATCTCTTTGGAGCTCCACCAAGGAAGCACTTCTGATACCCTGGCTGGAAATCAGGCTTTGCCACCACCAGAAAGCTCTTCCTCACCATAA 2892 0.4046 MLMCDNSMVIHSKIGVQVGVFGRRTSVGCGMLSQDMSSPLSTTKSKASNVWHFLPALIFFFSFISFGAVGTNNDKVVSIGVIIDLKSRVGKEEKVAIEIAAQNYNNSSKYHKLSLHFKDSGGVALRAISIAEEMIKIKKVQLLIGMHSWPEAVLVTEVGNQAQVPVISFASPVTTLPLSSFHWPFLVLMTNNRTAYVKCISDIVLIYNWQRVIVIYEEDAYGSDHGTLALLSEALQNVGSQIEFSLALPPYSSLSHPGGMVQIELLKLVNTQSRVFIVLQSSLPMVTCLFAEAKKMALVDMETAWVVPESITYTLDSVSDTVISSMEGVLGIKTYYLQNDTDYQSFQVQFRKSFQKENPEEENPRPGFYALQAYDSIRVVTHAMETLKNDDSSTNIFLKEMLSCNFLGLSGKIKFEHGQTLPSPILRIVNVIGKGYKEIDFWTEKYGFSKTLSFELAGQEVKTNEDTTSTIEGLGGPIIWPGNLMRTPKGWRMPTRAKPMKIGVPRRAPFEKFVKVDYNENSNQTQYSGFCIEIFEKVLDLLQYDLPYEIVPSNGTYADLVSLVYNKTFDAVVGDITILADRMQYVDFTLPYTESGLSMIVPEKTEPTTLIFMKPFTWEMWMVTVSILIYTMFAVWYLERDSNPEFSGPWKTQISVALWFTVFALFCAHREKIYSNFTQMVIVVWLFLCLILTSSYTANLSSMLTVQQLQPSKNIESLKWSNSKIGFSGATYVRKYLENVLHFKSQNLIEVSWDSIYTKEFESKRIAAAFIEIPYEKVFISKNCRGYSAFTPTYRFGGLGFMFQKGSPITRDFSKAILQLSENGDMKSLEDKWLNNPDECSTNITTNANGSLKLQSFWVLFATSVFTSTFCVTISTLLSMKNKQQQEAVESDRACSAIKTVWKKVLTLANYIYNAENTNQRQVPNAAHIEGVEDISLELHQGSTSDTLAGNQALPPPESSSSP* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02190 963 Gene3D - 388 501 - -
Rops2g02190 963 SUPERFAMILY Periplasmic binding protein-like I 73 491 IPR028082 -
Rops2g02190 963 CDD PBP1_GABAb_receptor_plant 78 452 IPR044440 -
Rops2g02190 963 SMART GluR_14 501 836 IPR001320 GO:0015276|GO:0016020
Rops2g02190 963 FunFam Glutamate receptor 499 609 - -
Rops2g02190 963 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 77 890 IPR015683 -
Rops2g02190 963 Gene3D - 609 750 - -
Rops2g02190 963 FunFam Glutamate receptor 196 364 - -
Rops2g02190 963 SUPERFAMILY Periplasmic binding protein-like II 478 836 - -
Rops2g02190 963 CDD GluR_Plant 498 834 - -
Rops2g02190 963 FunFam Glutamate receptor 609 746 - -
Rops2g02190 963 Gene3D - 71 196 - -
Rops2g02190 963 PIRSF IGluLR_plant 48 947 IPR017103 -
Rops2g02190 963 Gene3D - 197 363 - -
Rops2g02190 963 Gene3D - 502 608 - -
Rops2g02190 963 Pfam Bacterial extracellular solute-binding proteins, family 3 524 835 IPR001638 -
Rops2g02190 963 Pfam Ligand-gated ion channel 836 864 IPR001320 GO:0015276|GO:0016020
Rops2g02190 963 Pfam Receptor family ligand binding region 95 432 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02190 Rops-Chr2 34841430 34845715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02190 67 874 Ion Channels AT2G29120 32.547 1.59e-138 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02190 - - jre:109000927 974.156