Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02187 ATGTCTTCTTCCCCTTCCAATATGAAGTCCAAAGTTTCAAATGTTTGGCACTTCCTTCCTGCACTAATATTCTTTTTTCCCTTCATTTCCTTTGGAGTTGAGGCCACCAAAAATGACAAAGTTGTATCTGTTGGTGCAATCATCGACCTTAACTCTCGTGCTGGGAAGGAAGAGAAAGTAGCTATTGAACTTGCAGCTCAAAATTACAACAACTGTTCAAAGTATCACAAGCTGTCTCTATATTTCAAGGACTCTGGAGGGGTAGCTCTAAGAGCAATTTCTATAGCTGAAGAGATGATTAAAATAAATAAAGTGCAAGTGATAATTGGCATGCACTCATGGCAGGAAGCAGTTCTAGTAGCTGAGGTTGGGAATCATGCTCAAGTTCCTGTTATTTCATTTGCTTCACCAATCACCACCCCACCATTGTCATCATTTCGTTGGCCTTCCTTGGTACTAATGGCTAACAATCGTACTGCATATGTAAAATGCATTTCTGATATAGTTCATGCATACAATTGGCAAAGAGTCATAGTGATCTATGAAGAGGATGCATATGGTGGTGATAATGGGATGTTAACATTTCTATCTGAAGCACTGCAAAATATTGGTTCACAAATTGAGCTCTCTATGGCTCTCCCTCCATATTCTTCTTTGTCTCATCCAGGTTGGGTAGTTCAGGTAGAGCTGCTGAAGTTGCTTAATGCTCAATCTCGTGTCTTCATAGTTCTACAATCATCAATACCTATGGTAACTTGTTTGTTTGCGGAAGCTAAAAAGGTGGGACTTGTGGATATGGAATCAGCTTGGATAGTTCCAGAAAGCATAACTTATATGCTAGACTCTGTTAGTGACACTGTCATTTCATCCATGGAAGGTGTTTTGGGAATCAAGACATATTACTTACAAAATAGTACTAATTATCAGAGTTTCCAGGTCCAATTCAGGAAAAGCTTTCATAAAGAACATCCAGAAGAAGAAAACCTCCGACCTGGATTTTATGCACTGCAAGCATATGATAGCATTAGAGTTGTTACATGTGCCATCGACACATTCAGAAATCATAACAGTAGCCCTAAGATATTTCTAAAAGAAATGTTGTCTTGCAATTTCCTTGGTTTAAGTGGAAAAATAAAATTTGAACATGGGCAGACCTTGCCCTCTCCTATATTTAGGATTGTAAATGTGATTGGAAAGAGTTACAAAGAAATAGACTTCTGGACAGAAGAGTATGGATTCTCCAAAACCCTTTCCTTTGAACTAACTGGTCATGAAGTTAAAACTAATGAGGTCACCCGTACAATAGAAGGTTTGGCAGGTCCAATAATTTGGCCTGGGAATCTACTGAGGACTCCAAAGGGTTGGAAAATGCCTACAAGAGCAAAACCAATGAAAATTGGTGTTCCAATAAGGACTCCATTTGAGAAGTTTGTGAAGGTTGAGTACAATGAAAACTCAAATCAAACTAAGTATAGTGGATTCTGCATTGAAATTTTTGAAAAGGTTCTAGATCTATTGCAGTACGATCTACCATATAAAATAGTTCCCTTCAATGAAACCTATACTTATCTGGTTTCTCTTGTCTATAACAAGACTCTCGATGCTGTTGTTGGTGACATAACCATTGTGGCTGACAGAATGCAATATGTGGATTTTACACTGCCATATACAGAATCAGGATTGACAATGATAGTTCCAGCAAAATCTGAGGATACAGCTCTGATTTTTATGAAACCCTTTACCTGGGAAATGTGGATGGTTATAGTTTCCATTCTCATCTACACCATGTTCATAGTTTGGTACTTGGAGAGGGATTCCAATCCAGAATTCAGTGGCCCATGGAAGACTCAGATTAACATTGCTTTATGGTTTACCATCTTTTCTCTATTCTTTGCCCACAGGGAGAAAATCTATAGCAACTTCACTCGAGTTGTGATTGTTGTGTGGCTCTTCCTTGGTTTGATCCTAACCTCAAGCTACACTGCTAATCTATCCTCAATGCTCACAGTTCAACAATTGCAACCAAATGTTAAAAACATTGAGTCACTTAAATTGAGCAACTCCAAAATTGGTTTCTCAGGTGATCCATTTGTGAGAAAATATCTAGAAAATGTGCTTCATTTCAAATCACAGAATATTGTCAAAGTTAGCAGGGTCTACAACTACACTGAGGAGTTCAAAAGCAAGCGCATTGCAGCTGCCTTTATTGAAATCCCGTATGAAAAGGTATTCATGAGCAAGAACTGCCGGGGATACTCTGCCTTCACACCTACCAACAGATTTGGAGGGCTAGGCTTTATGTTCCAGAAAGGTTCTCCAATTACCAGAGACTTTTCCAAAGCTATATTGCAGATCTCAGAGAATGGAGACATGAAGTCACTAGAAGATAAATGGTTGAATAACCCAGATGAATGTTCAACCAATATAACTACCAATGCCAATGGAAGTTTGAAGCTTCAAAGCTTCTGGGTTCTTTTTGCAGCTTCTGTTTTCACATCTACCTTTTGTGTGACAATATCCACTGCATTCTCAATGAAAAATAAACAACAGCAACAAGAGGAATTTGAAGGCAATCATGCCTGTTCAGCTATTGAGACTGTTTGGAAGAAGCTGCTCACCCTAGCAAACTATATATACAATGTAGAAAACACTAATCAAAGGCAAGTCCCAAATGCAGCTCATATAGATGGTGTAGAAGAATTGTCTTTGGAGCTCCACCAAGGAAGCACTTCTGATACCCTGGCTGGAAATCAGGTTTTGCCACCACCAGAAAGCTCTTCCTCACCATAA 2790 0.3892 MSSSPSNMKSKVSNVWHFLPALIFFFPFISFGVEATKNDKVVSVGAIIDLNSRAGKEEKVAIELAAQNYNNCSKYHKLSLYFKDSGGVALRAISIAEEMIKINKVQVIIGMHSWQEAVLVAEVGNHAQVPVISFASPITTPPLSSFRWPSLVLMANNRTAYVKCISDIVHAYNWQRVIVIYEEDAYGGDNGMLTFLSEALQNIGSQIELSMALPPYSSLSHPGWVVQVELLKLLNAQSRVFIVLQSSIPMVTCLFAEAKKVGLVDMESAWIVPESITYMLDSVSDTVISSMEGVLGIKTYYLQNSTNYQSFQVQFRKSFHKEHPEEENLRPGFYALQAYDSIRVVTCAIDTFRNHNSSPKIFLKEMLSCNFLGLSGKIKFEHGQTLPSPIFRIVNVIGKSYKEIDFWTEEYGFSKTLSFELTGHEVKTNEVTRTIEGLAGPIIWPGNLLRTPKGWKMPTRAKPMKIGVPIRTPFEKFVKVEYNENSNQTKYSGFCIEIFEKVLDLLQYDLPYKIVPFNETYTYLVSLVYNKTLDAVVGDITIVADRMQYVDFTLPYTESGLTMIVPAKSEDTALIFMKPFTWEMWMVIVSILIYTMFIVWYLERDSNPEFSGPWKTQINIALWFTIFSLFFAHREKIYSNFTRVVIVVWLFLGLILTSSYTANLSSMLTVQQLQPNVKNIESLKLSNSKIGFSGDPFVRKYLENVLHFKSQNIVKVSRVYNYTEEFKSKRIAAAFIEIPYEKVFMSKNCRGYSAFTPTNRFGGLGFMFQKGSPITRDFSKAILQISENGDMKSLEDKWLNNPDECSTNITTNANGSLKLQSFWVLFAASVFTSTFCVTISTAFSMKNKQQQQEEFEGNHACSAIETVWKKLLTLANYIYNVENTNQRQVPNAAHIDGVEELSLELHQGSTSDTLAGNQVLPPPESSSSP* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02187 929 FunFam Glutamate receptor 161 329 - -
Rops2g02187 929 Gene3D - 45 387 - -
Rops2g02187 929 Pfam Bacterial extracellular solute-binding proteins, family 3 488 800 IPR001638 -
Rops2g02187 929 Gene3D - 461 572 - -
Rops2g02187 929 Gene3D - 736 807 - -
Rops2g02187 929 CDD GluR_Plant 462 799 - -
Rops2g02187 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 855 IPR015683 -
Rops2g02187 929 SMART GluR_14 465 801 IPR001320 GO:0015276|GO:0016020
Rops2g02187 929 PIRSF IGluLR_plant 13 913 IPR017103 -
Rops2g02187 929 Gene3D - 157 409 - -
Rops2g02187 929 Pfam Ligand-gated ion channel 801 829 IPR001320 GO:0015276|GO:0016020
Rops2g02187 929 FunFam Glutamate receptor 573 711 - -
Rops2g02187 929 FunFam Glutamate receptor 463 574 - -
Rops2g02187 929 Gene3D - 573 713 - -
Rops2g02187 929 SUPERFAMILY Periplasmic binding protein-like II 439 801 - -
Rops2g02187 929 Pfam Receptor family ligand binding region 59 397 IPR001828 -
Rops2g02187 929 SUPERFAMILY Periplasmic binding protein-like I 38 455 IPR028082 -
Rops2g02187 929 CDD PBP1_GABAb_receptor_plant 43 417 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02187 Rops-Chr2 34792495 34797566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02187 42 842 Ion Channels AT2G29120 32.293 8.85e-141 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02187 - - cill:122296491 990.334