Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02180 ATGGAAAACTCTTATACATATTCATCGCTCTCTATTGCTCACCTTTTCATGCTTAGCTTGTTGTGCTTTATGGTAACTAGTGAAGCTTCAAATAATAAGGTCTCTGCCATATATGTATTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTACATAAACACAGCTTTCAAGAGCGATTTTCTACCTTATGGTAGGGATTTTCCCAACCAAGTTCCCACGGGAAGATTCACAGATGGGAAGCTTGGAACTGATTTTCTTGCTTCATATCTAGGCCTGAAAGAGTTGTTGCCACCATATTTGGATCCAAATCTCAACGATAAAGAACTCATAACAGGAGTCAGTTTCGCCTCTGCTGGTTCTGGTTTTGACCCACTTACACCAACTCTGGGTAATGTAATTCCAATACCAAAACAGTTGGAACATTTCAAAGAATGCAAAAAGAGGTTGGAGGGTATGCTTGGTAAGGAAGGAACTGAAAAACATATGAAAAATGCTTTATTTTTCATCAGCGCAGGTACAAATGACTTCGTCATCAATTATTTTACCGTGCCAATACGAAGAAGGAACTACACCCCCTTAACTTACGGGCAATTCTTGCTTCAACATGTAAAAGAGTTCATACAGAATTTAAGGACAGAAGGTGCTCGAAAAATCGCAGTGGTTGGACTACCTCCAATGGGATGCTTGCCGATCGTGATCACCTTCAATTCCAACAATGCCTTTCTTGAACGTGGTTGTGTGGACAAGTATTCTGCTGTGGCAAGAAATTACAATCTAATGCTTCAACTTGAATTGTTGTCAATGCAATTGAATCTCTCTAATCCTCATGGTGCTAAGATTTCTTACATTGACATATATGGACCATTGATCAACATGATTCAAAGGCATGAGAATCTTGGGTTTGATGAGGTTGATCGTGGGTGTTGTGGAAGTGGTTACATGGAAACAACGTTTATGTGTAATAGGGCTTCCTATGTGTGCTCTGATCCATCAAAGTATGTGTTTTTCGATTCAATACACCCTTCAGAGAAGGCATACCAGAATGTATTCCTGGCAGCGCGTCCTACCATTGATGCCCTTGTCAACGGCTAG 1095 0.4064 MENSYTYSSLSIAHLFMLSLLCFMVTSEASNNKVSAIYVFGDSTVDPGNNNYINTAFKSDFLPYGRDFPNQVPTGRFTDGKLGTDFLASYLGLKELLPPYLDPNLNDKELITGVSFASAGSGFDPLTPTLGNVIPIPKQLEHFKECKKRLEGMLGKEGTEKHMKNALFFISAGTNDFVINYFTVPIRRRNYTPLTYGQFLLQHVKEFIQNLRTEGARKIAVVGLPPMGCLPIVITFNSNNAFLERGCVDKYSAVARNYNLMLQLELLSMQLNLSNPHGAKISYIDIYGPLINMIQRHENLGFDEVDRGCCGSGYMETTFMCNRASYVCSDPSKYVFFDSIHPSEKAYQNVFLAARPTIDALVNG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02180 364 CDD SGNH_plant_lipase_like 36 351 IPR035669 -
Rops2g02180 364 PANTHER GDSL ESTERASE/LIPASE EXL3 22 350 - -
Rops2g02180 364 SUPERFAMILY SGNH hydrolase 164 353 - -
Rops2g02180 364 Gene3D SGNH hydrolase 23 360 IPR036514 -
Rops2g02180 364 Pfam GDSL-like Lipase/Acylhydrolase 37 351 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02180 Rops-Chr2 34733800 34737502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02180 23 350 Pollen Coat Proteome AT1G75910 35.522 1.71e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02180 - - gmx:100804919 573.548