Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02178 ATGGAAAACTCTTATACATATTCATCGCTCTCTATTGCTCACCTTTTCATGCTTAGCTTGTTGTGCTTTATGGTAACTAGTGAAGCTTCAAATAATAAGGTCTCTGCCATATATGTATTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTATATAAACACAACTTTCAAGAGCGATTTTCCACCCTACGGTAGAGATTTTCCCAACCAAGTTCCCACGGGAAGGTTCACAGATGGGAAGCTTGGAACTGATTTTCTTGCTTCATATCTAGGCCTGAAAGAGTTGTTGCCACCATATTTGGATCCAAATCTCAACCATAAAGAACTCATAACAGGAGTCAGTTTCGCCTCTGCTGGTTCTGGTTTTGACCCACTTACACCAACTCTGGGTAATGTAATTCCAATACCAAAGCAGTTGGAACATTTCAAAGAATGCAAAAAGAGGTTGGCGGGTATGCTTGGTAAGGAAGGAACTGAAAAACATATGAAAAATGCTTTATTTTTCATCAGCGCAGGTACAAATGACTTCGTCATCAATTATTTTACCGTTCCAATACGAAGAAGGAGCTACACCCCCTTAACTTACGGGCAATTCTTGCTTCAACATGTAAAAGAGTTCATACAGAATTTAAGGACAGAAGGTGCTCGAAAAATCGCAGTGGTTGGACTACCTGCAATGGGATGCTTACCGATCGTGATCACCTTCAATTCCAGCAATGCCTTTCTTGAACGTGGTTGTGTGGACACGTATTCTGCTGTGGCAAGAAATCACAATCTAATGCTTCAACGTGAATTGTTGTCAATGCAATTGAATCTCTATAACCCTCATGGTGCTAAGATTTCTTACATTGACATATATGGACCATTGACCAACATGATTCAAAGGCATGAGAATCTTGGGTTTGATGAGGTTGATCGTGGGTGTTGTGGAAGTGGTTACATGGAAACAACGATTTTGTGTAATAAGGCTTCCTATGTGTGCTCTGATCCATCAAAGTATGTGTTTTTCGATTCAATACACCCTTCAGAGAAGGCATACCACAATGTATTCCTGGCAGCGCGTCCTACCATCGATGCCCTTGTCAACGGCTAG 1095 0.4128 MENSYTYSSLSIAHLFMLSLLCFMVTSEASNNKVSAIYVFGDSTVDPGNNNYINTTFKSDFPPYGRDFPNQVPTGRFTDGKLGTDFLASYLGLKELLPPYLDPNLNHKELITGVSFASAGSGFDPLTPTLGNVIPIPKQLEHFKECKKRLAGMLGKEGTEKHMKNALFFISAGTNDFVINYFTVPIRRRSYTPLTYGQFLLQHVKEFIQNLRTEGARKIAVVGLPAMGCLPIVITFNSSNAFLERGCVDTYSAVARNHNLMLQRELLSMQLNLYNPHGAKISYIDIYGPLTNMIQRHENLGFDEVDRGCCGSGYMETTILCNKASYVCSDPSKYVFFDSIHPSEKAYHNVFLAARPTIDALVNG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02178 364 CDD SGNH_plant_lipase_like 36 351 IPR035669 -
Rops2g02178 364 Gene3D SGNH hydrolase 23 360 IPR036514 -
Rops2g02178 364 Pfam GDSL-like Lipase/Acylhydrolase 37 351 IPR001087 GO:0016788
Rops2g02178 364 PANTHER GDSL ESTERASE/LIPASE EXL3 22 349 - -
Rops2g02178 364 SUPERFAMILY SGNH hydrolase 163 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02178 Rops-Chr2 34693473 34697162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02178 23 350 Pollen Coat Proteome AT1G75910 35.329 7.60e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02178 - - gmx:100804919 574.318