Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02170 ATGGGAATATGTTGGATGTTTCCTCGCCTTCTCAATTTTTGGAAGAGACAGAGAGAGAAACTGAACCCTCTTTGTTTTACAGCTGAAAAATCATACCGGCAATTTTTTTTGGGGAAAGTGATTACAACAGAATCTGAGGGTTTTATAGGCAGAAGTTCAGGGTTGGCAATGAAGAAGGTTTCCAAGACCAGCTGCAAGTCTGCATCACACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTTGATGACCTGCAGCTGATATTCCTGGATCTGCAGTTTGCCAGAAAAGAGAGCCGTACAGTTGATGCTGCGGTCCTTGAGGAACAAGTTCATCAGATGCTTCGTGAGTGGAAGTCTGAGCTCAATGAACCCTCACCTGCTTCTTCTTTGCAGCAAGGTGGCAGTCTCGGGTCATTCTCCACCGACATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAGCCTGAACCTAATGATCAGACTATGCAGGCTGGGGGTCAGGTCATATACCAAGAGGGCCAACAGCAACATGATTTCCCATTGGTTGAGGAATGCAAACACTCAACTTCAGGAGTTCAAAATGTGGCAGCTAACAACCCAGATGGGCCTGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTTTGATCACAGCTTTTATACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTATCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCAGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGCTCTTTGATCTTTCTGTCCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGACAAGCCTCGTAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTGATTAATGAATTTGGGGGGCTGAAGAGATCCTATTACATGGATCCACAACCCCTGAACCATTTTGAGTGGCATCTTTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGATTGGAACTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAGGTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAAGCTCTCTGCTGAGTTTCCGCCTGATAACAAAAGGACTGCTAAAGGCAGAGCAAAAATTAGTGCCAAAGTTGGCTTAGGTGGTGTCTATTCGACTTCACACAGAGTGACTCCACTAAATGGAACATACGAGTATGGGTTAGCTGCTCCATATGACTATCTTGTTGAGGACATGGGCGACTACTATGGGACATGA 1602 0.4563 MGICWMFPRLLNFWKRQREKLNPLCFTAEKSYRQFFLGKVITTESEGFIGRSSGLAMKKVSKTSCKSASHRLFKDKAKNRVDDLQLIFLDLQFARKESRTVDAAVLEEQVHQMLREWKSELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTMQAGGQVIYQEGQQQHDFPLVEECKHSTSGVQNVAANNPDGPALEYHQFDLHQDFDHSFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKVTNDSVADLQKQMGKLSAEFPPDNKRTAKGRAKISAKVGLGGVYSTSHRVTPLNGTYEYGLAAPYDYLVEDMGDYYGT* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02170 533 PANTHER TRANSCRIPTION FACTOR VOZ1 57 528 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02170 Rops-Chr2 34500033 34507303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02170 59 531 VOZ-9 Transcription Factor Family AT1G28520 71.283 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Rops2g02170 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02170 - - gmx:100798565 925.62