Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02166 ATGGATTTCAGTACCAATGGCACTGAAGAAAGTGAACTGTATCATGCTCAGATCCATTTGTATAAGCATGTTTACAACTTCGTGAGCTCCATGGCTCTCAAGTCTGCTATGGAGCTAGGCATAGCAGATGTAATTCACAACCACGGAAAACCCATGACTCTTCCTGAATTGGCCTCAGCCTTGAAACTCCACCCCTCAAAAGTTGGTGTCCTTCATCGCTTCTTGCGGCTGCTAACATACAATGGATTCTTTGCCAAAACAACAGTACCAGGCAAAGAAGAAACAGCATATGTTCTGACTCCTCCATCCAAGCTTCTCATCAGAAGCAAATCAACCTGTTTGGCACCTATAGTTCGTGGAGCTCTTCATCCAAGTTCCCTTGACATGTGGCACTCCTCCAAGAAATGGTTCACTGAGGACAAGGAACTCACCCTGTTTGAGAGCGCAACAGGGGAGAGCTTCTGGGACTTTCTCAACAAAGATTCTGACACACTGAGCATGTTTCAGGATGCCATGGCAGCTGATTCCCATATGTTCAAGCTTGCCCTCAAGGAATGCAAGCATGTTTTTGAGGGTTTCGGCTCCCTTGTTGATGTAGGAGGTGGAACTGGAGGTGTCACAAAACTCATCCATGAAGCTTTCCCTCACCTCAAATGCACTGTTTTTGACCAACCACAGGTTGTGGCTAACTTGTCTGGAAACGAAAATTTGAACTTTGTTGGCGGAGATATGTTCAAATCCATCCCTCCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGACTGGAATGATGAACTCTCCTTGAAGATATTAAAGAACTGCAAGGAAGCTATTTCAGGCAGAGGGAAAGAAGGAAAGGTGATTATCATAGACATATCAATTGATGAAACAAGTGATGATCGGGAATTGACAGAGTTGCAACTGGACTATGACTTGGTGATGCTCACTATGTTCAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAACTCATATTCGAGGCAGGCTTCAGCAGCTACAAGATCACCCCCATTTGTGGCTTCAAGTCTCTCATTGAAGTTTATCCTTAA 1074 0.4432 MDFSTNGTEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADVIHNHGKPMTLPELASALKLHPSKVGVLHRFLRLLTYNGFFAKTTVPGKEETAYVLTPPSKLLIRSKSTCLAPIVRGALHPSSLDMWHSSKKWFTEDKELTLFESATGESFWDFLNKDSDTLSMFQDAMAADSHMFKLALKECKHVFEGFGSLVDVGGGTGGVTKLIHEAFPHLKCTVFDQPQVVANLSGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDELSLKILKNCKEAISGRGKEGKVIIIDISIDETSDDRELTELQLDYDLVMLTMFNGKEREKKEWEKLIFEAGFSSYKITPICGFKSLIEVYP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02166 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 109 IPR036390 -
Rops2g02166 357 Gene3D - 1 106 IPR036388 -
Rops2g02166 357 FunFam O-methyltransferase ZRP4 109 357 - -
Rops2g02166 357 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Rops2g02166 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Rops2g02166 357 Pfam O-methyltransferase domain 130 339 IPR001077 GO:0008171
Rops2g02166 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 357 IPR016461 GO:0008168
Rops2g02166 357 PANTHER O-METHYLTRANSFERASE 15 342 IPR016461 GO:0008168
Rops2g02166 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 356 IPR029063 -
Rops2g02166 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Rops2g02166 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02166 Rops-Chr2 34464604 34466362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02166 28 344 Monolignol Biosynthesis Gene Families AT5G54160 33.436 1.48e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02166 K22588 - gmx:100807589 604.364