Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02163 ATGTTGGTGGAAGTGGCAATTACTCTACTGGTGATAGCTCTGTTGATACACTTGCGTCCCACACCAACTGCAAAATCCAAGGCACTCCGGCACCTTCCAAACCCTCCAAGTCCCAAACCACGTCTGCCATTCGTGGGACACCTGCACCTTTTGGACCATCCTCTGCTGCACCAATCCCTCATACGTCTCTCCCACCGCTATGGCCCTTTGTACTCTCTCTACTTTGGGTCCATGCCTACCGTTGTTGCCTCCACCCCTGACTTGTTCAAACTCTTCCTTCAAACCCACGAGGCTTCTTCCTTCAACACCAGGTTCCAAACCTCTGCCATCAGGCGCCTTACCTACGACAACTCCGTCGCAATGGTCCCCTTCGGTCCTTACTGGAAGTTCATCAGGAAGCTCATCATGAACGACCTCCTCAATGCCACCACCGTCAACAAGTTGAGGCCACTCAGGACCCTCGAAATCCGCAAGGTTCTCGGGGTTTTGGCCCACAGTGCGGAGACTCAACAGCCCCTCAATGTCACCGAGGAGCTCCTTAAATGGACTAACAGCACCATCTCTAGGATGATGTTGGGTGAGGCTGAAGAGATTAGGGATATCGCTCGTGACGTGCTTAAGATCTTCGGCGAATATAGTCTTACCGACTTTATTTGGCCTTTGAAGAAGCTCAAGGTTGGACAATATGAGAAGAGGATTGAGGACATCTTTAACAGGTTTGATCCTGTCATTGAAAAGGTCATCACGAAACGCCAAGAGATAAGGAAGAGGAGAAAGGAGGGAAATGGAAAAGTCGAGGAGGGTGAGCAGAGCGTAGTTTTTCTCGACACTCTGCTTGATTTTGCTGAGGACGAGACCATGGAGATCAAAATCACCAAGGAACAAATCAAGGGTCTTATTGTGGATTTCTTCTCGGCTGGGACAGATTCCACAGCAGTGGCAACAGACTATGCATTGTCAGAGCTGATCAACAACCCCAGGGTGTTGCAAAAAGCTCGAGAGGAGATTGATAGTGTTGTGGGAAAAGATAGACTTGTTGACGAAGCAGATGTTCAAAATCTTCCTTACATCAGAGCCATCGTGAAGGAGACATTCCGCATGCACCCGCCACTACCTGTAGTGAAGAGAAAATGTGTAGCAGAGTGTGAGGTGGACGGATATGTGATCCCAGAGGGAGCATTGATACTTTTCAATGTTTGGGCCGTAGGAAGAGATCCTAAATACTGGGAAAAGCCGTCGGAATTTTATCCTGAGAGATTCTTAGATTCTGCTGGTAAAGGGGAATCAACAAGCCCAGTTGATCTTAAGGGACAACATTTCCAGCTTCTTCCATTTGGGTCTGGAAGGAGGATGTGTCCTGGAGTGAATTTGGCTACCTCAGGAATGGCCACACTGCTTGCATCTGTTATCCAATGCTTTGACCTGCAGGTAGTGAGTCCTCAAGGCCAAATACTGAAAGGTGATGATGCCAAAGTAAGCATGGAAGAAAGACCTGGTCTTACAGTTCCAAGGGCACACAATCTCATGTGTGTACCGCTTGCAAGACCAAGCGTCACGGCTAAACTCCTTTCCTCTTAA 1578 0.4854 MLVEVAITLLVIALLIHLRPTPTAKSKALRHLPNPPSPKPRLPFVGHLHLLDHPLLHQSLIRLSHRYGPLYSLYFGSMPTVVASTPDLFKLFLQTHEASSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRTLEIRKVLGVLAHSAETQQPLNVTEELLKWTNSTISRMMLGEAEEIRDIARDVLKIFGEYSLTDFIWPLKKLKVGQYEKRIEDIFNRFDPVIEKVITKRQEIRKRRKEGNGKVEEGEQSVVFLDTLLDFAEDETMEIKITKEQIKGLIVDFFSAGTDSTAVATDYALSELINNPRVLQKAREEIDSVVGKDRLVDEADVQNLPYIRAIVKETFRMHPPLPVVKRKCVAECEVDGYVIPEGALILFNVWAVGRDPKYWEKPSEFYPERFLDSAGKGESTSPVDLKGQHFQLLPFGSGRRMCPGVNLATSGMATLLASVIQCFDLQVVSPQGQILKGDDAKVSMEERPGLTVPRAHNLMCVPLARPSVTAKLLSS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02163 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 507 - -
Rops2g02163 525 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 SUPERFAMILY Cytochrome P450 30 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 CDD CYP93 68 512 - -
Rops2g02163 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Rops2g02163 525 FunFam Cytochrome P450 family protein 26 510 - -
Rops2g02163 525 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02163 525 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02163 Rops-Chr2 34409322 34411578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02163 1 520 Cytochrome P450 AT5G06900 35.217 1.80e-109 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02163 - - ag:BAA76380 909.442