Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02161 ATGGATTTCAGTACCAATGGCAATGAAGAGAGTGAACTGTATCATGCTCAAATTCATTTGTATAAGCATGTTTACAACTTCGTGAGCTCCATGGCTCTCAAGTTTGCTATGGAGCTTGGCATAGCTGACATAATTCACAACCACGGAAAACCCATGACTCTTCCTGAATTGGCCTCAGCTTTGAAACTCCACCCCTCCAAAGTTGGTGTCCTCCATCGCTTCTTGCGGCTCCTAACACACAATGGATTCTTTGCCAAAACAACAGTGCCAGGCTATCAAAGAAAAGAGAATCATAGTGTTTGA 303 0.4323 MDFSTNGNEESELYHAQIHLYKHVYNFVSSMALKFAMELGIADIIHNHGKPMTLPELASALKLHPSKVGVLHRFLRLLTHNGFFAKTTVPGYQRKENHSV* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02161 100 FunFam Coniferyl alcohol 9-O-methyltransferase 3 100 - -
Rops2g02161 100 PANTHER O-METHYLTRANSFERASE 15 92 IPR016461 GO:0008168
Rops2g02161 100 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Rops2g02161 100 SUPERFAMILY "Winged helix" DNA-binding domain 10 88 IPR036390 -
Rops2g02161 100 Gene3D - 1 99 IPR036388 -
Rops2g02161 100 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 100 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02161 Rops-Chr2 34340737 34341039 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02161 8 79 Monolignol Biosynthesis Gene Families AT5G54160 36.986 7.86e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02161 K22588 - ag:AAC49856 170.629