Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02150 ATGACATGGTGCAATGACTCAGATGAGGAAAGGGGCATTGAACTAATCACCCCCAATGTTGTTCCTAGAGCTAGTAACACTGTTGTTACTAACTCAAAATCAACAGAAATTCGAACCATAACTTGCCCCTCATGTGGCCATAACATCGAATTAAAAGATCAGGCTGGAATCAATGAGTTGCCGGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAGGAGATTCTAGAACATTTGGAAGCAAAGGTGCTATCTGATGTGCCTAAGCTTCATCCCCTTATTGATGAGTTCATACCAACGCTTGAAGGCGAAAACGGGATCTGTTATACACACCCAGAAAAACTACCAGGTGTAAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCATCTAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGTAAAACTAGACCAGTTTATATTGGTGGTGCAGTGAAGGGTTTCAAAAAGATACTGGTCCTCTACACCAACTATGGCAGGCAAAAGAAACCAGAGAAGACCAACTGGGTAATGCATCAATACCACCTTGGCAGTAATGAAGAAGAGAAAGATGGAGAATTAGTGGTTTCAAAGGTCTTCTACCAAACTCAACCAAGACAATGTGGTAATTCCATCATAAAGGATCCTTATGAACAAACACTGACTCACAGAAGTGTCCATGATGATGACATTATGATACCTAAAAATCCATCTCTTGTGGACTACTACAATGCTTCTTTCATGAATTATGATCATGTGGGTCATAGTATGGAAAGCTCACCTCAACTTATTCCAAACTTGGTTGTGCAAGGTGATAGCTCTTCTCTTATTCGATTAGCAATGGATGCAAACAAAGCCAGGTTGGACAGAAAATAG 936 0.4156 MTWCNDSDEERGIELITPNVVPRASNTVVTNSKSTEIRTITCPSCGHNIELKDQAGINELPGLPAGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVYIGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSIIKDPYEQTLTHRSVHDDDIMIPKNPSLVDYYNASFMNYDHVGHSMESSPQLIPNLVVQGDSSSLIRLAMDANKARLDRK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02150 311 FunFam NAC domain-containing protein 73 72 226 - -
Rops2g02150 311 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
Rops2g02150 311 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
Rops2g02150 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 31 248 IPR044799 GO:0003700
Rops2g02150 311 MobiDBLite consensus disorder prediction 142 158 - -
Rops2g02150 311 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
Rops2g02150 311 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Rops2g02150 311 MobiDBLite consensus disorder prediction 136 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02150 Rops-Chr2 34174686 34178157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02150 1 232 NAC Transcription Factor Family AT4G28500 72.961 5.40e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops2g02150 NAM 1.8e-21 No_clan