Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02135 ATGGATTCGGGTAATCTCCTCTCACAGTCAACCCTGCCATTTACTATCTGTGCCACGTTGTTGTTACTCTTGGTTCTTTATTTGCTACTACTGAGAAGCCGCAGTGGTGTAGCTACAAATGCACCACCAGTAGCTAGCGGCGCTTGGCCTTTGATAGGGCACCTCCACCTTTTAGGTGGGTCACAGCCACCTCACGTTACCTTGGGTCACATGGCCGATAAATATGGACCCATTTTCACCTTGCGTTTTGGTGTTCACCCAACTTTGATCGTGAGCAGCTGGGAAATGGCCAAACAGTGTTTCACCATAAACGACAAAGCGTTTGCTTCCCGTCCTAAAACTGTAGCTTCTGAAGTTCTGGGCTACAACTATTCCATGCTTGGTTTAAGCCCCTACGGTTCGTATTGGCGTCAGGTGCGCAAGATAGCCACCCTGGAAGTCCTCTGTACCCAACGAATAGAGATGCTGAAGCACGTCATGGAATCAGAGGTGAAGGAAGCCATGAAAGAGAGTTACGATATTGGGCTAAAGGGTGGTTCAGTGACTGAGATGAAGAAATGGTTTGGGGACATAACATTAAACGTTATGTTCAGAACTGTGGTTGGAAAACGTTTTGTCGGGGACCGTGAAGAGAAAAAGAACGAACGAATCAGGAAAGCAATTAGGGACCTGTTCCGTCTCTGCGGGTTTGGCTTGATGAACACAAAAGCAACAGGAATAGTGGTTCTGGGGAATGGAAAGGTAAACCATGACTTCATGGACGTGCTTCTTTCCACCGTTGATCATGAAGGTTTTGACGGTCATGATGCCGATACCATAATCAAATCTACGTGCCTGCAACTAATTCTAGCTGGCACAGATACCACAACAGGGACATTAACCTGGGCTCTCTCCTTACTTCTCAACAATCGTGAAGTCCTAAATAAGGCCATACATGAATTAGACATACAAATTGGTAGGGAAAAGATGGCACTGGAATCAGATTTGAACAAGCTGGAGTATCTCCAAGCCATCATCAAGGAAACACTACGTCTATACCCACCCGCACCACTCAACGTGCCTCATGAGTCCATGGAAGAATGCACTGTGGGTGGATATCATGTGCCTGCTGGCACGCGTCTCTTGACCAACCTTTCAAAGCTTCAACGAGATCCTTTGCTATATTCTGAACCTTTAGAGTTTCGTCCAGAGAGATTCCTTACTACCCACAAGGACATTGATGTCAAGGGTCAGCATTTTGAATTGATTCCATTCGGTGCAGGCAGAAGAATGTGTCCAGGAGTCTCATTTGGTATGCAAACAATGCAGTTAACACTTGCTACTCTGCTACATGGGTTTGATATAGTGACTCCCGGTGACGGACCAGTTGATATGGTGGAACAAAACGGGTTAACAAACATCAAAGCCACTCCGCTTCATGTCTTTCTTACGCCACGTCTTCCTGCACATGTTTATGGTCAAAATTAA 1467 0.4608 MDSGNLLSQSTLPFTICATLLLLLVLYLLLLRSRSGVATNAPPVASGAWPLIGHLHLLGGSQPPHVTLGHMADKYGPIFTLRFGVHPTLIVSSWEMAKQCFTINDKAFASRPKTVASEVLGYNYSMLGLSPYGSYWRQVRKIATLEVLCTQRIEMLKHVMESEVKEAMKESYDIGLKGGSVTEMKKWFGDITLNVMFRTVVGKRFVGDREEKKNERIRKAIRDLFRLCGFGLMNTKATGIVVLGNGKVNHDFMDVLLSTVDHEGFDGHDADTIIKSTCLQLILAGTDTTTGTLTWALSLLLNNREVLNKAIHELDIQIGREKMALESDLNKLEYLQAIIKETLRLYPPAPLNVPHESMEECTVGGYHVPAGTRLLTNLSKLQRDPLLYSEPLEFRPERFLTTHKDIDVKGQHFELIPFGAGRRMCPGVSFGMQTMQLTLATLLHGFDIVTPGDGPVDMVEQNGLTNIKATPLHVFLTPRLPAHVYGQN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02135 488 SUPERFAMILY Cytochrome P450 48 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 Gene3D Cytochrome P450 41 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 Gene3D Cytochrome P450 237 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PANTHER CYTOCHROME P450 82C3-RELATED 247 485 - -
Rops2g02135 488 FunFam Cytochrome P450 82C4 233 477 - -
Rops2g02135 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Rops2g02135 488 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 Pfam Cytochrome P450 249 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 Pfam Cytochrome P450 43 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02135 488 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02135 Rops-Chr2 33924680 33928249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02135 22 485 Cytochrome P450 AT4G31940 46.484 5.62e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02135 - - mtr:25493100 646.351