Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02131 ATGGATTTGGATAATCTCCTTTCACAGTCAACCCTACCATTTACAATCAGTGCCACGTTGTTGTTTCTCTTCGTTCTTTATTGGCTACTTCGAAGCCGCACTAGCGTAGCCACAAAGGCACCACCACCACCAGAAGCTGGCGGCGCTTGGCCTTTGATAGGACACCTCCACCTTTTAGGTGGGTCACAACCCCCTCACGTAACCTTGGGTAACATGGCCGACAAATATGGACCCGTTTTCACCTTGCGTTTGGGCGTTCACCGAACTTTGATCGTGAGCAACTGGGAAATGGCCAAACAGTGTTTCACCGTAAACGACAAAGCATTTGCTTCGCGTCCTAAATCTGTAGCCTTTGAAGTTTTGGGCTACAATTTTTCCATGTTGGGTTTCAGTCCCTACGGTTCGTATTGGCGTCAGGTGCGCAAGATAGCCACGCTAGAGGTCCTCTCTACCCAACGAATAGAGATGCTGAAGCATGTCATGGAATCAGAGGTGAAGGAAGCTATCAAAGAGAGTTACGAATTTTGGGTAAAGAGTGGTTCTGAAAAGGAAAAGGCAGTGACTGAGATGAAGAAATGGTTTGGGGACATAACACTAAACGTTTTGCTCAGAACAGTGGTGGGAAAACGTTTATTTGGGGTGGGTTGTGATCATGATGTGGAAGAGAACGAACGGGTCCGGAAAGCGCTTAGGGACCTGCTAGATTTCAGCGGGTCCTTCGTTGTGTCTGATACGCTGCCGTTTTTGAGATGGTTAGATTTGGATGGAAGAGAGAAGGAAATGAAGAAAACGGCGAAAGTGTTGGATGACTTTATTCAAGTTTGGCTTGATGAACACAAAAGCAAGAGAAATCATGGTTCAGGGGAATTGGAGGATAACCGTGACTTCATGGACGTGCTTCTTTCCACCGTTGATGATGAAGGTTTTGACGGTCGTGATGGCGATACCATAATCAAAACTACATGCCTGACACTAATTATAGCTGGCACAGACACTACAACAGGGACAATGATCTGGGCTCTTGCCTTACTTCTCAACAACCGTGAAGTTCTAAATAAGGCTATACATGAATTAGACACACAAATTGGAGGGGAAAAGATAGCAATGGAATCAGACTTGAAGAAGTTGGAGTATCTCCATGCCATCATCAAGGAAACATTACGTGTGTATCCAGCCTCACCACTCAACCTGCCTCATGAATCCATGGAAGATTGTATCGTAGGTGGATACCATGTGCCAGCGGGCACACGTCTCTTAACTAACATTTCAAAAATTCAACGAGATCCCTTGCTATATTCCGAACCCTTGGAGTTTCATCCAGAAAGATTCCTCACAGCCCATAAGGACGTTGATGTCAAAGGCCAACATTTTGAATTCATTCCATTCGGTGCGGGTAGAAGAATGTGTCCGGGACTCTCATTTGGTATGCAATTATTACAAATTACACTTGCTACTTTGCTGCATGGGTTTGACATAGTGACTCTTGATGAGGGACCAATTGATATGGTTGAACAAAGCGGGTTAACTAACATCAAAGCCACTCCGCTCCACGTCATTCTTACGCCACGTCTCTCTACACATGTTTATGGTCAAAATTAA 1599 0.4509 MDLDNLLSQSTLPFTISATLLFLFVLYWLLRSRTSVATKAPPPPEAGGAWPLIGHLHLLGGSQPPHVTLGNMADKYGPVFTLRLGVHRTLIVSNWEMAKQCFTVNDKAFASRPKSVAFEVLGYNFSMLGFSPYGSYWRQVRKIATLEVLSTQRIEMLKHVMESEVKEAIKESYEFWVKSGSEKEKAVTEMKKWFGDITLNVLLRTVVGKRLFGVGCDHDVEENERVRKALRDLLDFSGSFVVSDTLPFLRWLDLDGREKEMKKTAKVLDDFIQVWLDEHKSKRNHGSGELEDNRDFMDVLLSTVDDEGFDGRDGDTIIKTTCLTLIIAGTDTTTGTMIWALALLLNNREVLNKAIHELDTQIGGEKIAMESDLKKLEYLHAIIKETLRVYPASPLNLPHESMEDCIVGGYHVPAGTRLLTNISKIQRDPLLYSEPLEFHPERFLTAHKDVDVKGQHFEFIPFGAGRRMCPGLSFGMQLLQITLATLLHGFDIVTLDEGPIDMVEQSGLTNIKATPLHVILTPRLSTHVYGQN* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02131 532 Coils Coil 341 361 - -
Rops2g02131 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 SUPERFAMILY Cytochrome P450 43 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 Pfam Cytochrome P450 46 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 PANTHER CYTOCHROME P450 82C3-RELATED 21 529 - -
Rops2g02131 532 CDD CYP82 77 523 - -
Rops2g02131 532 FunFam Cytochrome P450 82C4 33 521 - -
Rops2g02131 532 Gene3D Cytochrome P450 36 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02131 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02131 Rops-Chr2 33882235 33886394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02131 21 529 Cytochrome P450 AT4G31940 48.062 2.11e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02131 - - mtr:25493100 769.615