Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02128 ATGGATTCGGATAATCTCTTTTCACAGTCAACCCTGCTAGTTACACTATGTGCCACGTTGCTGTTTCTCTACGTTCTGTATTGCCTACTGAGAAGCCACACTGGTGTGGCAACAAAGGCACCACCACCACCGGAAGCTGGCGGCGCTTGGCCTTTAATAGGGCACCTCCACCTTTTAGGTGGGTCCCAGCCACCTCACGTTACCTTGGGTAACATGGCCGACAAATATGGACCCATTTTCACCTTACGCTTGGGCGTTCACCAAACTTTGGTCGTGAGCAGCTGGGAAATGGCTAAACAGTGTTTTACGGTAAACGACAAAGCGTTTGCTTCCCGTCCTAAAAATGTAGCATTTGAAGTTTTGGGCTACAACTATTCCTTGTTGGCTTTCAGTCGCTACGGTTCGTATTGGCGTCAAGTGCGCAAGATAGCCACCCTGGAAGTCCTCTGTACCCAACGAATAGAGATGCTTAAGCATGTCATGGAATCGGAGGTGAAGGCAGCGATTAAAGACAGTTACGATTTATGGCTAAAGAATGGTTCGGGAAAGGCAGTGACTGAGATGAAGAAGTGGTTTGGGGACATAACACTAAACGTTATGTTCAGAGTGGTGGTGGGAAAACGTTTTGTTGGAAACAGTGACGAGGAAGAGAACGAACGGATCCGGAAAGCAATTAGGGACCTGTTCCGTCTCAGTGAGTCCTTCACTGTTTCTGATGCGCTGCCGTTTTTGAGATGGTTGGATTTGGATGGAAAAGAGAAGGAAATGAAGAAAACAGCAAAAGTGTTAGATGACTTCATTCAAGTTTGGCTTGATGAGCACAAACGCAATAGGAAGGGTAATCATGATTTCATGGATGTGCTTCTTTCCACCGCTGATGATGACGGTTTTGACGGTCGTGATGCCGATACCATAATCAAAGCTACATGCCTGACATTAATTTTAGCTGGCACAGACACTACAACAGGGACATTAACTTGGGCTCTCTCCTTACTTCTCAATAATCGTGAAGTCCTAAATAAGGCCATACATGAATTTGACTCACAAATTGGAAGGGAAAAGATGGCAGTGGATTCAAACTTGAACAAGTTAGAGTATCTCCAAGCCATCATTAAGGAAACACTACGTTTGTACCCACCCGGACCACTCAATTTGCCTCATGAGTCCATGGAAGACTGTGTTGTGGGTGGATACCATGTGCCTGCTGGCACACGTCTCTTAACTAACATTTCAAAACTTCAACGAGATCCCTTACTATATTCTGAACCTTTAGAGTTTAGCCCAGAGAGATTCCTCACAACCCACAAAGATGTTGATATCAAGGGTCAACATTTTGAATTGATTCCATTTGGTGCAGGTAGAAGGATGTGTCCAGGAGTCTCATTTGGTATGCAAATAATGCAGTTAACACTTGCTACTCTGTTACATGGGTTTGATATAGTGACTCCTGATGGTGGACCAGTTGATATGGTTGAACAAAGTGGGTTAACCAACATCAATGCCTCTCCACTCCAAGTCATTCTCACGCCACGTCTATCTGCACAAGTTTATGATCAAGATTAA 1563 0.4472 MDSDNLFSQSTLLVTLCATLLFLYVLYCLLRSHTGVATKAPPPPEAGGAWPLIGHLHLLGGSQPPHVTLGNMADKYGPIFTLRLGVHQTLVVSSWEMAKQCFTVNDKAFASRPKNVAFEVLGYNYSLLAFSRYGSYWRQVRKIATLEVLCTQRIEMLKHVMESEVKAAIKDSYDLWLKNGSGKAVTEMKKWFGDITLNVMFRVVVGKRFVGNSDEEENERIRKAIRDLFRLSESFTVSDALPFLRWLDLDGKEKEMKKTAKVLDDFIQVWLDEHKRNRKGNHDFMDVLLSTADDDGFDGRDADTIIKATCLTLILAGTDTTTGTLTWALSLLLNNREVLNKAIHEFDSQIGREKMAVDSNLNKLEYLQAIIKETLRLYPPGPLNLPHESMEDCVVGGYHVPAGTRLLTNISKLQRDPLLYSEPLEFSPERFLTTHKDVDIKGQHFELIPFGAGRRMCPGVSFGMQIMQLTLATLLHGFDIVTPDGGPVDMVEQSGLTNINASPLQVILTPRLSAQVYDQD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02128 520 Pfam Cytochrome P450 46 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PANTHER CYTOCHROME P450 82C3-RELATED 20 517 - -
Rops2g02128 520 FunFam Cytochrome P450 82C4 33 509 - -
Rops2g02128 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Rops2g02128 520 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02128 520 CDD CYP82 77 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02128 Rops-Chr2 33839857 33847021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02128 21 517 Cytochrome P450 AT4G31940 49.805 2.56e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02128 - - gmx:100778017 741.495