Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02126 ATGGATTCTGACTTCTGGACCTCGCGCCTTGCCGCTGCTAAACGTCAGTACACGCTTCAGCATCATCACCCAAGTTCCCATTTAGATCGGTTGGGAATAGATGATTTTGATGTGGAAGAAGAGGTACGACCAGATTTCCCTTGCCCGTATTGTTATGAAGACTTTGACATAGCGTCTTTGTGTTCTCATCTTGAAGACGAGCATTCTTGTGAATCAAAAGTCACGATTTGTCCTATATGCTCTGTCAAGGTTGCACGGGACATGTTGAGTCACATAACACTGCAACATGGGCACTTGTTTAAGTTACAGAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACATTGTCCCTTTTGGGTCGAGATCTTCGTGAGGCTCATTTACAGGCGCTTCTTGGTGGCGGTGGTGGTGGATATCGGTCACACAGTGCCACAGTGTCTAATGCAGCTACTGATCCATTCCTGTCCTCTTTTATTTTGAATTTCCCTGCTTGTGAAGCTGAAGAAATTTCTAAATCTGTGGTAACAAGTGCTGAAGATTCTCCTGCAAAGAATACGACACCTGTACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTATTGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCTGGGAGATCTAATTTTGTGCAGGATTTGTTTCTTTCAACTTTGCTAGGCGACTAA 702 0.4416 MDSDFWTSRLAAAKRQYTLQHHHPSSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTICPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPNSQTLSLLGRDLREAHLQALLGGGGGGYRSHSATVSNAATDPFLSSFILNFPACEAEEISKSVVTSAEDSPAKNTTPVHIWKSSFDPSLSIEEREKRMRQAAGRSNFVQDLFLSTLLGD* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02126 233 Pfam Stress-induced protein Di19, C-terminal 119 230 IPR027935 -
Rops2g02126 233 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 231 IPR033347 -
Rops2g02126 233 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Rops2g02126 233 SUPERFAMILY TRAF domain-like 46 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02126 Rops-Chr2 33790398 33793559 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops2g02126 Di19_C 1.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02126 - - gmx:100792230 422.935