Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02107 ATGGAAGCATTCAAGTTGTACAATGATTATGCCTACACTCTTGGATTTGGAGTTCATTGTGGCAAGCAACATCTTTATGAAAGTACAACACTCATTCGCCAAAAAGAATATCTTTGTCGTAATGAAGGTCAAAAGGGTTCATGGAAGCTTGGAGAGGATGTTAATAAAAGACTTATAGCAAGATATAATTGCCCTACAATGATTCGATTTTTGGTTAACAAAGATGGTTCCATATGGAAGGTTACTAAGCATGTAGAAGAACACAATCATGAGCTAGCAAAACTTGAAGAAAGGCATCTAATAAGGTCTTTTAGAGAGGTAACAAAAGAAAAGGTTGTTGTTATTAACAAGCTAATAGCTAGTGGGACAAACGTGAAAACAACTTACAAGATAATGATTAAAGAATGTGGTGGCACTGAGAGTGTGGGGTTCACAATAAGTGATTGTTACAATTATGTGAGCAATCAAAAGAAGAAATCCATTGATGCTGAAGATGCTCAAAGTCTTATTGACATGTTTAGGAGAAAGAAGAATCAAGACATTGGATTTTTATACACATTTCAGGTAGATCAAGAAGGAAAATTGACAAATATCTTTTGGAATGATGGACAATCCATGGTAGATTATGATGCTTTTAGAGATGTGGTGATTTTTTATACTACCTACCGCACAAATAAGTTCATTGAGAAATATGGTACTCATGTTGTCTTTGGGGTGAACATAGGAGGAAAAGATGTGGTTCATATCAAGCAGTTAAAAAATTCATATCTTCAGCCCACTGATGTGCAGAAATTGCTGAAGAAAATAGCTGATGAGAGGTTTTCTGAGAATGTAAATAGAAGTTATAATGGAAATACTACTGAAATATCAGGAAACCAAGAGTCACCTAATGTTGTATCAATGTCATTTGTGCCTATTACGTCACTACTGAATTCTGTTCCTGGTTATGGATTTCTAAGTCATACAGTAAATTTGTACCTTAGATGGTATGATCTTCCTTTTGGATTCGGTGCCAGGCATAGAAGAAACATGTCTCCGACACTCCGGTTCACATTCATGGGACCCAAGCTTTATGTTAATACTGTGCAGGTTGACTCTAGATGTCGGCCTGTAACAGGTATTCGCTTGTTTTTGGAAGGCAAAAACAGTGATCACCTGGGGATTCATGTGGAAAATATGAAGTGGAAAATGTTTTCTCATGTGTGCATTGCCCCAGTAGAGTGCGATAGTTCTCATATTGATGAGTCTCCATGCATTGTGACAAAGGCCTGGTTCGAGGTCAGGCTTATAAAAATGAAGAAGGTTCTGTTCCTGAGGCTTGGATACTCGACAGTAGCATCCTCAAGGATTGGCAGATCAGAATGGGATGGTGCTCCATCTATATCTCGAAAACCAGGATTCTTTTCAGCATTATTGAGCTCAAGGCTTAGCAAACAATTGCATTCTCCTCTGGGACTGATATTGAGAAGCCAAGAAAAGAGGATAACAATTCAGTGTTAG 1500 0.3767 MEAFKLYNDYAYTLGFGVHCGKQHLYESTTLIRQKEYLCRNEGQKGSWKLGEDVNKRLIARYNCPTMIRFLVNKDGSIWKVTKHVEEHNHELAKLEERHLIRSFREVTKEKVVVINKLIASGTNVKTTYKIMIKECGGTESVGFTISDCYNYVSNQKKKSIDAEDAQSLIDMFRRKKNQDIGFLYTFQVDQEGKLTNIFWNDGQSMVDYDAFRDVVIFYTTYRTNKFIEKYGTHVVFGVNIGGKDVVHIKQLKNSYLQPTDVQKLLKKIADERFSENVNRSYNGNTTEISGNQESPNVVSMSFVPITSLLNSVPGYGFLSHTVNLYLRWYDLPFGFGARHRRNMSPTLRFTFMGPKLYVNTVQVDSRCRPVTGIRLFLEGKNSDHLGIHVENMKWKMFSHVCIAPVECDSSHIDESPCIVTKAWFEVRLIKMKKVLFLRLGYSTVASSRIGRSEWDGAPSISRKPGFFSALLSSRLSKQLHSPLGLILRSQEKRITIQC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02107 499 Coils Coil 78 98 - -
Rops2g02107 499 Pfam MAC/Perforin domain 224 283 IPR020864 -
Rops2g02107 499 Pfam FAR1 DNA-binding domain 6 93 IPR004330 -
Rops2g02107 499 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 389 479 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02107 Rops-Chr2 33552388 33562882 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops2g02107 MACPF 1.2e-07 CL0293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02107 - - aew:130783732 270.396