Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02097 ATGGCCGAGATTTCCACTTCAGGGTACAAGGAATATGTTGCTGGCTTGCTCGCTGGTGTTGCCGCAGTTGCCACTGGCCACCCCTTTGACACCGTAAAGGTGAAGCTGCAAAAGCACAACACAGAAGCACATTTAGTTCATTACAGAAATGGATTGCATTGCACTGCTAGGATATTGCAGACTGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGCTGGGATGGCTTTGGAAGGATCCCTTTTCTTTGGCATTTATTCCCAGACAAAAATGTACCTTCAGGGGGGTGTGCAAAGTGGTGAACCGCGGCCTCAAGTAGTAATACCATCTGCAGCTTTTAGTGGTGCCATCAACAGTTTTGTATTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATCCAAGGCACTGACTCTTTGGTTCCTATGTCCAGTAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTTTAAAAACTGAAGGGGTGAAAGGAATTTTTCGCGGAAGTTGTACAACATTGCTTAGAGAATCTTTAGGGAATGCTACCTTTTTCAGTGTATACGAATATATGCGTTATCACATGCATTCACATATCAAACCTGCTTCAACCAATTATAGCCACCTGACTGATATTGGAATTGGGATCGTTACTGGTGGCCTTAGTGGTGTGGCTTTTTGGTTGGTAGTTTTGCCCCTTGACGTGGCAAAGACTCTAATTCAGACAAACCCTGATAAAAACTGTTCAAGGAATCCTTTTCAGATCTTGAGTTCAATCTACAGGAGGGCTGGATTGAAGGGGTGCTATACAGGTCTGGGTCCTACAGTAAGTCGAGCATTTCCTGCTAATGCAGCAACAATTGTCACCTGGGAACTAGCATTGAAAATGTTAGGCATTAAGCATGACTAA 918 0.4368 MAEISTSGYKEYVAGLLAGVAAVATGHPFDTVKVKLQKHNTEAHLVHYRNGLHCTARILQTEGIKGLYRGATSSFAGMALEGSLFFGIYSQTKMYLQGGVQSGEPRPQVVIPSAAFSGAINSFVLGPTELIKCRMQIQGTDSLVPMSSRYSSPLDCALKTLKTEGVKGIFRGSCTTLLRESLGNATFFSVYEYMRYHMHSHIKPASTNYSHLTDIGIGIVTGGLSGVAFWLVVLPLDVAKTLIQTNPDKNCSRNPFQILSSIYRRAGLKGCYTGLGPTVSRAFPANAATIVTWELALKMLGIKHD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02097 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Rops2g02097 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 300 - -
Rops2g02097 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Rops2g02097 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Rops2g02097 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Rops2g02097 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Rops2g02097 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Rops2g02097 305 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Rops2g02097 305 FunFam Mitochondrial carrier protein 2 109 - -
Rops2g02097 305 Gene3D Mitochondrial carrier domain 13 304 IPR023395 -
Rops2g02097 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02097 Rops-Chr2 33394188 33399202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02097 4 300 Antiporters AT1G79900 30.795 5.11e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02097 K15109 - gmx:100815087 530.406