Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02091 ATGTCGAGCTCTGGTCCCTGCAGCAACTGTGGCAAAACCTCCTTTATCCGCGACGATGTCTCTGGAGAATTGGTGTGTTCGTCATGCGGCATCGTTCAACAGTTCGATCAATTCGATGCTCAAATCGGCGGCATCAGCGGTCCTCAAGGTACATTTATCAACGTTGGTACCGCCGGTTCAGGTAGCGTTTACTCTTATAGAGACAGAAAATTGTTTAGTGCATACAATTCCATAGATGAATTAACATATAAGTTAGGGTTAAGTTCAAAGAGTGGGGACATTAGGAGCATGGTATCGACAATCACGGAGGGTGAATTCGGGCAAGGTAATTGGTTTCAGGTGTTGATTGGTGCGTGTGCTTATGTTGTCATGCGAAAGGATGATCGCCCTTTGCCCATGGCTGAAGTGGCTGAAGTGGTTGGTTTTGATGTGTATGAGCTGGGAAAGATGATTCTTCGTGTTATTGAGTTTTTGGATTTGAAAAGACCTGATTTTCCTGAGTTTGATATAGTGCATTCATTAGAAAGGACCCTTAAGAATTCTCATAGTTTTGCTGAAGTTGAGAGGAGTAAACTGGAGAGAATGCGAAAGCAGGGGATATTTTTGATACAGTGTGCGGTGAAGTGGTTTTTGAGCACAGGCCGCCGGCCGCTTCCCTTGGTGGTGGCGGTTTTGGTTTTGGTTGCTGAAATAAATCAAGTTGAAGTTCGGATGGATGATTTGGCTAAGGAAGTTCATGCTGTGGTTTCTACTTGTAGAACAAGATATAGGGAGCTCCTTGAGACACTTGTAAAAGCTGCACAAGTGTTGCCTTGGGGAAAGGATATAAATACTAAAAACATTGTTAAGAATGCATCGTTTGTGATTCAGTATATGGAGAGGAAGTCTATGTCAAAACCTGTTGAGAAGAGGAAGAATCTTGATCAGCCTGGGTTAGATTTGGCAGATGTGGTTTCTGAATGCTTAAGACAGGATGATGAATACGAATATGGGACTGATGGCATAACTACCTCGAAAGATTCTCAATATTTTTCATTAGGAAGTAATGCTGATAGAGCAGGCATCAAGGATGTTGACAGGTTGCAGATATCACCTGAATGTTTATGCATGCTGTACGAGAAATTTTTAAACGAGAAAAGTAGTGCTAAGTCTTCAAGAAGGAGTGCAAATGCTCAGAAACAGAAAAGGTTACGACTTGATCTTCAGGAGTGTAGGGACTGGTGGAATGGAAAATCAGAAATGAGCAAAAAGCTTCTACTCAAACATTTACTAGAGAAGGATGTTGGAATGGATACCATGCCTCCATCGTTTGTCACTGGTCAATTGAAATGTAATATGAGGCGAGAGAGGATCAATGCTGCTAAGATGCGGATAAAAAGAATTATGTATCCATTAGATGCTGGTGTGGGTGATACTGCAAATCCTGGCCCTTTAGATGGCACTTATCTTGAGAGAAGGAAGAAAAGAAGAGGAGTGGTAGTTGACGATATTGATTGGGAAGACTTAATTATTGAGACCCTGATTCTTCATCAAGTAAAGGAGGAGGAAATTGAGAAGGGGCATTACAATACCTTACTGGATCTACATGTGTTTAACTTTGGCATTTTATGA 1611 0.4171 MSSSGPCSNCGKTSFIRDDVSGELVCSSCGIVQQFDQFDAQIGGISGPQGTFINVGTAGSGSVYSYRDRKLFSAYNSIDELTYKLGLSSKSGDIRSMVSTITEGEFGQGNWFQVLIGACAYVVMRKDDRPLPMAEVAEVVGFDVYELGKMILRVIEFLDLKRPDFPEFDIVHSLERTLKNSHSFAEVERSKLERMRKQGIFLIQCAVKWFLSTGRRPLPLVVAVLVLVAEINQVEVRMDDLAKEVHAVVSTCRTRYRELLETLVKAAQVLPWGKDINTKNIVKNASFVIQYMERKSMSKPVEKRKNLDQPGLDLADVVSECLRQDDEYEYGTDGITTSKDSQYFSLGSNADRAGIKDVDRLQISPECLCMLYEKFLNEKSSAKSSRRSANAQKQKRLRLDLQECRDWWNGKSEMSKKLLLKHLLEKDVGMDTMPPSFVTGQLKCNMRRERINAAKMRIKRIMYPLDAGVGDTANPGPLDGTYLERRKKRRGVVVDDIDWEDLIIETLILHQVKEEEIEKGHYNTLLDLHVFNFGIL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02091 536 Gene3D - 170 267 - -
Rops2g02091 536 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Rops2g02091 536 SUPERFAMILY Zinc beta-ribbon 7 39 - -
Rops2g02091 536 SUPERFAMILY Cyclin-like 197 264 IPR036915 -
Rops2g02091 536 Gene3D - 64 162 - -
Rops2g02091 536 Gene3D - 4 41 - -
Rops2g02091 536 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 6 340 IPR000812 GO:0006352|GO:0070897
Rops2g02091 536 SUPERFAMILY Cyclin-like 74 163 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02091 Rops-Chr2 33249563 33251498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02091 7 262 Inorganic Solute Cotransporters AT2G01280 22.097 5.98e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02091 K15196 - gmx:100796841 784.252