Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02074 ATGGATGAAGCTTGCAATTCTTGGATAAGGAGGACTAAATTCTCTCACACGGTGTGTCACCGTTTGGATTATTCCAGATTAGCCTCTTTCAACATTAAGTCAGAGGCAGTACACAAATCAGGTCTGAAATCAAGGCCAGAACCAGCAGTTCCTGTTGTTTCTAAGGTTTCACAGGTTCAGAAGAATCCCATAACAAACAAGCAGAGATCTTTGTCTCCTTTGCCAGAAACCTCTCTCTCAGAAACCTTTAAGGAAGCCAAGCATGAACAGAAGAGGTTCTCAACACCTGGTCCAAGGAGGAAAGACCAAGATAAGAGAATCATGGGGAAGCTACTGAACAAGGATTCACAAGTTTCCAATTCTAAATCACCATACAGGAGTCCAATGAAGCACTTTGCATCAATGAAATCAAGTGACAAGTCCAAGCACAAAAAGGAATCAGGATGGACAAAGTATTTTGACCATGGTGGAGGAAAGGTTACTGCTGTTGAAACAGCTGAGGAATGGAATGTTGACCTCTCTAAGCTCTTTGTTGGTCTTAGGTTTGCTCATGGGGCTCATAGTAGGCTTTACCATGGTATGTATGAGGATGAATCTGTTGCTGTGAAAATTATCAGGGTACCAGATGATGACGAAAATGGAACATTGGCTGATCGATTAGAGAAACAGTTCATTAGAGAAGTCACACTTTTATCTCGCCTCCACCATCCAAATGTTATAAAGTTCGTAGCAGCTTCCAGAAAGCCACCTGTTTATTGTGTTATCACAGAGTATCTATCAGAAGGTTCTTTGAGGGCATATTTGCATAAGTTGGAGGGAAAAACTATTTCTCTACAGAAGCTAATTGCTTTTGCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCGAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATCAAAGGAGACTTTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCATACTGTGACTTACTTGCTGATGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGGAAGGTTGATGTATATAGTTTTGGGCTCATCTTATGGGAAATGGTGACTGGAACAATACCATATGAGGATATGACTCCCATCCAAGCAGCTTTTGCTGTAGTAAATAAGAATTCAAGGCCTTTTATTCCTTCAAACTGCCCACCTGCTATGCGAGCTTTAATTGAGCAATGTTGGTCTTTGCATCCGGACAAAAGGCCTGAGTTCTGGCAAGTTGTTAAGGTCTTAGAGCAATTTGAAACTTCGCTTGCTCGTGATGGAACCCTGACTTTGGTGGAAAACCCTTGTCAAGATCATAAAAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGTCCTGTGCATCACCATAGTGGCCCTGTGCCTAAACCTAAATTTACATGA 1449 0.4196 MDEACNSWIRRTKFSHTVCHRLDYSRLASFNIKSEAVHKSGLKSRPEPAVPVVSKVSQVQKNPITNKQRSLSPLPETSLSETFKEAKHEQKRFSTPGPRRKDQDKRIMGKLLNKDSQVSNSKSPYRSPMKHFASMKSSDKSKHKKESGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGLRFAHGAHSRLYHGMYEDESVAVKIIRVPDDDENGTLADRLEKQFIREVTLLSRLHHPNVIKFVAASRKPPVYCVITEYLSEGSLRAYLHKLEGKTISLQKLIAFALDIARGMEYIHSRGVIHRDLKPENVLIKGDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPFIPSNCPPAMRALIEQCWSLHPDKRPEFWQVVKVLEQFETSLARDGTLTLVENPCQDHKKGLLHWIQKLGPVHHHSGPVPKPKFT* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02074 482 MobiDBLite consensus disorder prediction 82 143 - -
Rops2g02074 482 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 113 438 - -
Rops2g02074 482 MobiDBLite consensus disorder prediction 113 127 - -
Rops2g02074 482 ProSiteProfiles Protein kinase domain profile. 176 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02074 482 MobiDBLite consensus disorder prediction 82 111 - -
Rops2g02074 482 SMART serkin_6 176 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02074 482 PRINTS Tyrosine kinase catalytic domain signature 256 269 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 PRINTS Tyrosine kinase catalytic domain signature 340 350 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 PRINTS Tyrosine kinase catalytic domain signature 294 312 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 PRINTS Tyrosine kinase catalytic domain signature 359 381 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 PRINTS Tyrosine kinase catalytic domain signature 403 425 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 Pfam Protein tyrosine and serine/threonine kinase 183 432 IPR001245 GO:0004672|GO:0006468
Rops2g02074 482 FunFam Kinase suppressor of Ras 1 165 259 - -
Rops2g02074 482 CDD STKc_MAP3K-like 183 432 - -
Rops2g02074 482 SUPERFAMILY Protein kinase-like (PK-like) 161 432 IPR011009 -
Rops2g02074 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Rops2g02074 482 Gene3D Transferase(Phosphotransferase) domain 1 261 458 - -
Rops2g02074 482 Gene3D Phosphorylase Kinase; domain 1 164 260 - -
Rops2g02074 482 FunFam serine/threonine-protein kinase HT1 261 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02074 Rops-Chr2 32986205 32990240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02074 1 482 MAP Kinase Kinase Kinase AT5G58950 58.555 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops2g02074 PK_Tyr_Ser-Thr 1.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02074 - - gmx:100784454 825.469