Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02060 ATGGAACCCAGAAATAAGAGATCTAGAGCCAATCGTTTTCCAATTCTGTTTCCAGTCAAGAACAACTACGAAAAGAATTTACCTGCTGCAATGGTATCTTCTTGCTTGAATTTAAAAAAAAAGTCTATTATTTTCAATGTGGGAGGTGGAAAGACTTGGAAATTTGGTTTATACCACCATAAAAGTCGTGGTTCTGAAGCCAGGATATCCACTGGATGGAAATCCTTTTGCGCGGATCACCAATTAAAAGCAGGGGACAAAATTGTTGTTGAGGTTGCTGATGCATTAAAGAATCACTTCAATCCTGACATTGTTACATGTTAA 324 0.3735 MEPRNKRSRANRFPILFPVKNNYEKNLPAAMVSSCLNLKKKSIIFNVGGGKTWKFGLYHHKSRGSEARISTGWKSFCADHQLKAGDKIVVEVADALKNHFNPDIVTC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02060 107 SMART B3_2 13 103 IPR003340 GO:0003677
Rops2g02060 107 Pfam B3 DNA binding domain 25 94 IPR003340 GO:0003677
Rops2g02060 107 CDD B3_DNA 27 91 IPR003340 GO:0003677
Rops2g02060 107 Gene3D - 5 106 IPR015300 -
Rops2g02060 107 ProSiteProfiles B3 DNA-binding domain profile. 27 107 IPR003340 GO:0003677
Rops2g02060 107 SUPERFAMILY DNA-binding pseudobarrel domain 25 99 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02060 Rops-Chr2 32733910 32735294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops2g02060 B3 2.4e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02060 - - mesc:110629300 49.6766