Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02041 ATGTCAACCTTTTTGTGCAGTTCTACTATTCCACAGGAAAACTTCCATTCATTCCCTATGCTTTTCTTTACTATCTTTCTGCTCTTACTTTCTCTTATATTCATCATCAAATGGTTTTCCAATTCTGAAACCAACAAAAACTCACCCCCTTCACCTCCAAGACTTCCTCTACTTGGTAATCTCCATCAACTTGGCGAGTTCCCACAGCACAGTCTCCAATCTTTAGCTCAAAAATATGGTCCTGTAATGTTGCTTCATTTTGGGAAGGTGCCAGTTCTTGTGGTTTCCTCTGCTGATGCAGCACGTAAGGTAATGAAAACACATGACTTGGTCTTCTCTGACAGGCCACATCGCAAAATATCTGATATCCTGTTATATGGTTCCAAAGATATGGCAAATGCTCCTTATGGTGAGTATTGGAGGCAAATTAGGAGTCTTGGTGTGTTACATCTTTTGAGTAACAAAAGGGTTCAATCCTATAGTCGTGTGAGAGAGGAAGAAACTGCAAGGTTGATGGAAAGTATTAAGGAGTGTTGTTCTTCTTCCTTGACAGTGAATTTATCTGAGTTGTGCTCTTCACTTACGAATGATATAGTATGTAGGGTGGCTTTGGGAAAGAGATACCGTGAAGAAGGAGGGAGGAAGTTTCAGCAGCTGTTGTTGGAGTTTGGAGAGTTAGTGGGTGCTGTAACTATAGGGGAATTTATACCTTGGCTTGATTGGTTGAGTAAGGTTAATGGTTTCTATGGTAGAGCAGAGAGAGTGGCCAAACATTTGGACGAGTTTATAGAACAAGTGATTGAGGAGCATATTAGTTGTAGGTCAAGGAATAGCAGCGATGGCCATGTTGATGATGTAGATAGTGAGGATCATAATGATTTTGTTGATGTTTTGCTTTCGATCCAGAAGACCAACGCTATTAGCTTCCCAATTGATAGAACTACAATCAAGGCTTTGATACTGGACATGTTTGTTGCAGGTACTGACACTACCTACACGGTCCTAGAGTGGGCCATGACAGAACTGTTAAGGCACCCAAATATGATGCATAAATTGCAGGATGAGGTGAGAAGCGTGGTTGGTAACAGAACTCATGTCACTGAGGAGGATTTGTGTCACATGAACTACTTAAAGGCTGTGATTAAAGAAACTCTTCGCCTTCATCCCCCAATTCCCTTATTAGTTCTTAGGAAATCCATGAAAGATATCAAAGTTGATGGCTATGATATTGCAGCTGGCACACTGGTAATAGTGAATGCTTGGGGAATTGCAAGAGACCCTTCATATTGGGACCAACCTCTAGAGTTTAAACCAGAAAGGTTCCTCAACAGCTCAATAGATTTCAAAGGACATGATTTTGAATTCATCCCATTTGGAGCAGGAAGAAGGGGTTGCCCTGCAATACCGTTTGCAATTGCTGTCAATGAGGTTGTACTAGCAAACCTTGTCCACCAATTTGATTGGACATTGCCTGGTGGGGTAACAAGGGAGGACTTGGACATGTCTGAAACTACTGGCCTCACAAGTCATAGAAAATATCCTCTCATGGCACTAGCAACCAAATATGAGAGAAATGAATAG 1581 0.4149 MSTFLCSSTIPQENFHSFPMLFFTIFLLLLSLIFIIKWFSNSETNKNSPPSPPRLPLLGNLHQLGEFPQHSLQSLAQKYGPVMLLHFGKVPVLVVSSADAARKVMKTHDLVFSDRPHRKISDILLYGSKDMANAPYGEYWRQIRSLGVLHLLSNKRVQSYSRVREEETARLMESIKECCSSSLTVNLSELCSSLTNDIVCRVALGKRYREEGGRKFQQLLLEFGELVGAVTIGEFIPWLDWLSKVNGFYGRAERVAKHLDEFIEQVIEEHISCRSRNSSDGHVDDVDSEDHNDFVDVLLSIQKTNAISFPIDRTTIKALILDMFVAGTDTTYTVLEWAMTELLRHPNMMHKLQDEVRSVVGNRTHVTEEDLCHMNYLKAVIKETLRLHPPIPLLVLRKSMKDIKVDGYDIAAGTLVIVNAWGIARDPSYWDQPLEFKPERFLNSSIDFKGHDFEFIPFGAGRRGCPAIPFAIAVNEVVLANLVHQFDWTLPGGVTREDLDMSETTGLTSHRKYPLMALATKYERNE* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02041 526 Gene3D Cytochrome P450 35 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PANTHER CYTOCHROME P450 71B11-RELATED 30 520 - -
Rops2g02041 526 CDD CYP71-like 78 515 - -
Rops2g02041 526 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 Pfam Cytochrome P450 49 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 FunFam Cytochrome P450 83B1 35 518 - -
Rops2g02041 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Rops2g02041 526 SUPERFAMILY Cytochrome P450 49 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02041 526 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02041 Rops-Chr2 32503377 32505562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02041 45 520 Cytochrome P450 AT3G48270 50.943 1.46e-180 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02041 - - gmx:100819183 762.681