Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02040 ATGTCAACTTTTCTGCAATTTTCTATTCCACAGGAAAACTTCCAATCATTCCCTATGCTTTACTTTACTGTCTTTCTGCTCTTACTTTCCCTTCTATTCATCATCAAATGGTATTTCAATTCTGCAACCAGCAAAATCTCACCCCCTTCACCTCCAAGATTCCCTCTATTTGGTAATCTCCATCAACTTGGCTTGCTCCCTCACCGCACACTTCAATCTTTAGCTCAAAATTATGGCCCTCTAATGTTGCTTCATTTTGGGAAGGTGCCAGTACTTGTAGTCTCCTCTGCTGAAGCAGCCTCTAAGGTAATGAAAACCCATGACTTGGTCTTCTCTGATAGACCACAGCGTAAAATTTTTGGTATCCTGTTATATGGTTCCAAAGACGTGGCAAGTGCTCCTTATGGAGAGTACTGGAGGCAAGTAAGGAGTGTCAGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCAATCCTATAGTCGTGTGAGAGAGGAAGAAACTGCAAGATTGATGGAAAATATTAAGGAGTGTTGTTCTTCTTCCTTGCCGGTGAATTTATCTGAGTTGTGCTCTTCACTTACGAATGATATAGTATGTAGGGTGGCTCTGGGAAAGAGATATAGTGAAGAAGGAGGGAGGAAGTTTCAGCAACTGCTTTCTGAGTTTGGGGAGTTATTGGGTACTCTCACTCTAGGGGACTATATACCTTGGCTTGATTGGTTGACCAAGGTTAATGGTTTCTATGGTAGAGCAAACAGAGTGGCCAAGCAATTGGACGAGTTCATAGAACAAGTGATTGAGGAGCATGTTAGTTTTAGGTCGAGGAATAGCAGTGATGACGACGTAGATATTGAGGACCATAATGATTTTGTGGATGTTTTGCTTTCAATCCAAAAGACCAACGCTGTTGGCTTCCCAATTGATAGAACTACAATCAAGGCTTTGATACTGGACATGTTTTTTGCAGGTACTGACACTACCTACATAGTCCTAGAGTGGGCAATGTCAGAACTGTTAAAGCACCCAATTATCATGCAGAAACTGCAAAGTGAGGTGAGAAGTGTGGTTGGTAACAGAACTTATGTAACTGAGGATGATTTGCGTCACATGAACTACTTAAAGGCTGTGATTAAAGAGACTCTACGCCTCCACCCCCCAGCTCCCTTATTGGCTCCTCGGAAATCCATGCAAGATATCAAACTAAATGGTTATGATATTGAAGCTGGCACACAGGTATTAGTGAATGCTTGGGGAATTGCAAGAGACCCTTCATATTGGGACCGACCTCTAGAGTTTAAGCCAGAAAGGTTCTTCAACAGTTCAATAGATTTCAAAGGACATGATTTTGAATTTATCCCATTTGGAGCAGGAAGAAGGGGTTGTCCTGGAATGCAATTTGCCATGGCAGTAGATGAGGTGGTGCTAGCAAACCTTGTCCACCAATTTGATTGGACAACAGAGGAGGACTTGGACATGTCTGAAGCTGTTGGCCTTACCTGTCATAGAAAATATCCTCTCATGACCATAGCAACCAAATATGAGAGAAATGAAAAAACAACCACCAAAAAGCATAAGATATGA 1581 0.4194 MSTFLQFSIPQENFQSFPMLYFTVFLLLLSLLFIIKWYFNSATSKISPPSPPRFPLFGNLHQLGLLPHRTLQSLAQNYGPLMLLHFGKVPVLVVSSAEAASKVMKTHDLVFSDRPQRKIFGILLYGSKDVASAPYGEYWRQVRSVSVLHLLSNKRVQSYSRVREEETARLMENIKECCSSSLPVNLSELCSSLTNDIVCRVALGKRYSEEGGRKFQQLLSEFGELLGTLTLGDYIPWLDWLTKVNGFYGRANRVAKQLDEFIEQVIEEHVSFRSRNSSDDDVDIEDHNDFVDVLLSIQKTNAVGFPIDRTTIKALILDMFFAGTDTTYIVLEWAMSELLKHPIIMQKLQSEVRSVVGNRTYVTEDDLRHMNYLKAVIKETLRLHPPAPLLAPRKSMQDIKLNGYDIEAGTQVLVNAWGIARDPSYWDRPLEFKPERFFNSSIDFKGHDFEFIPFGAGRRGCPGMQFAMAVDEVVLANLVHQFDWTTEEDLDMSEAVGLTCHRKYPLMTIATKYERNEKTTTKKHKI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02040 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Rops2g02040 526 Gene3D Cytochrome P450 40 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 Pfam Cytochrome P450 48 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 FunFam Cytochrome P450 83B1 35 509 - -
Rops2g02040 526 CDD CYP71-like 78 506 - -
Rops2g02040 526 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g02040 526 PANTHER CYTOCHROME P450 71B11-RELATED 30 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02040 Rops-Chr2 32476752 32479045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02040 49 511 Cytochrome P450 AT3G48270 52.452 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02040 - - gmx:100819183 720.694