Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02027 ATGTATTTATGCGCTGCTCAACGGCGTCGTTTTAGGGCAGAGGATCATAAAATCTTGGCCAGGTCCTTTTCTCTATTTCTAACACACTGTGCCGTGCTGCGCTGCTACGCTTCAACTGAACTCGAAGGCGGCGCCACCACCTTGCTGCTCTACGCTCTGCCGTCGTCCTCCGACTTGAAAAGGAAATTGATGGCGTATAGACGTTGCCTCTTGATAAGAGGGAACCTCATAGATCAGAGGTGTCACCCTTCTTTCAGTTATGTTCTCCATGGCGATGAAAGGAAACGTGAACAGCCAGATGAAAAGTCATCATCAACAGGCATTAGTAATTTTATCCAAACAAGGTCCTTTGGGAGCTCTCTTAATGGATCAATGGGTCTTTTTGCCTCTTCTCAAGATAGATTCCTTTCTCCGTATGCTGGATATAATTTTTGCCGATATATGTCGACAAATAAGGGTCTAGATGACATTGACAAAATAACTGATGTAGCAAATGTTCTCACTGACACAACCATGGAGTCTGTAGCTTCTCAGGCTCCCATTGTTAGTGAAGTTGCGATTGCTGCTGCTGATTCTTATTTGCCTGTACAGGCCTTGCAGTATGTGATAGATGCCGTGCATTCCTTTACTGGCTTAAACTGGTGGGCATCCATAGTTCTAACAACCCTCTTGATTCGAAGCGCAACTCTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTCTCACTATTGAGGCCTCACATGGAAGAGTTAAGGGAACAGATGGAAGGGAAGGCTATGGATCCCGCGGCTCTTGCTGAAGGTCAGAAGCAGATGAAAAAGCTATTCAAAGAACATGGTGTGACACCATTTACGCCATTGAAGGGACTGTTTATTCAAGGTCCTATCTTTATAAGTTTTTTCCTTGCGATAACAAATATGGCTGAAAAAATGCCATCATTCAAGCAGGGTGGAGCTTACTGGTTTATTGATCTCACAACTCCAGATGCCTTGTACATTCTTCCAGTTTTAACTGCACTGTCATTCTTGATAACAGTAGAGAGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATATCTCTAGAGGTCTTGCTGTTCTTACAGTTCCTTTCACCATGGGATTCCCAAAGGCTATATTTTGTTACTGGGTTACATCAAATTTGTTTTCACTTGTGTACGGACTTGCGCTTAAAGTTCCTGGTGTAAAGAAAACTTTGGGGCTTCCTGAAATACCCGCTGCACCACCCACCAGTTCTCCACAATCTCCCTTTTCTATATTTCCAGCACTAAAACAAGCTACATCAACGACAAATGAGCCAAGGTCAACGCCAGTTGAATCATCAAGACATTCAGATAAAAAAAAGATATCTTCTTCTTCTGTTATTAGTCAAAGGCTTAGAAGCTTAGAGAAACAGGTGAAAGGAAGAAAGAAAAACAAAAACTGA 1470 0.4265 MYLCAAQRRRFRAEDHKILARSFSLFLTHCAVLRCYASTELEGGATTLLLYALPSSSDLKRKLMAYRRCLLIRGNLIDQRCHPSFSYVLHGDERKREQPDEKSSSTGISNFIQTRSFGSSLNGSMGLFASSQDRFLSPYAGYNFCRYMSTNKGLDDIDKITDVANVLTDTTMESVASQAPIVSEVAIAAADSYLPVQALQYVIDAVHSFTGLNWWASIVLTTLLIRSATLPLLINQLKATSKLSLLRPHMEELREQMEGKAMDPAALAEGQKQMKKLFKEHGVTPFTPLKGLFIQGPIFISFFLAITNMAEKMPSFKQGGAYWFIDLTTPDALYILPVLTALSFLITVESNMQEGMEGNPVAGTMKNISRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLALKVPGVKKTLGLPEIPAAPPTSSPQSPFSIFPALKQATSTTNEPRSTPVESSRHSDKKKISSSSVISQRLRSLEKQVKGRKKNKN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02027 489 MobiDBLite consensus disorder prediction 437 452 - -
Rops2g02027 489 CDD 5TM_Oxa1-like 211 408 - -
Rops2g02027 489 MobiDBLite consensus disorder prediction 437 489 - -
Rops2g02027 489 PANTHER OXA1 169 482 IPR001708 GO:0016020|GO:0032977
Rops2g02027 489 Coils Coil 474 489 - -
Rops2g02027 489 NCBIfam membrane protein insertase YidC 213 400 IPR028055 -
Rops2g02027 489 Pfam 60Kd inner membrane protein 214 400 IPR028055 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02027 217 488 Chloroplast and Mitochondria Gene Families AT2G28800 21.942 2.50e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02027 K03217 - gmx:100817052 658.677