Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02022 ATGGCAAGTGAGATATTAAACTCTGTATCTCAGAGGCTGCAGTCAGCAGAAGCAAGACGGGACATCTATGTGAAAGTTAACCCCCCTGTTACCCTCAAGTTTGAAGATGTTGTGCATAAAACCAAAATTAGCAAAAGGGAAGGCTTGTTCTGCAAAAAGGAGGTAAGTTCTGAGGAGAGACTGATCTTAAAAGGGGTTAGTGGAGCTGTTTTTCCAGGTGAATTGTTAGCCATTTTAGGCCCTTCTGGTAGTGGGAAAACAACTCTGTTAACTGCTCTTGGAGGAAGGCTAAATGATAATACCACTAGAGGAAGCATAAGCTACAATGGAAAACCCCTCTCAAAATCAGTAAAGCAAAACTTGGGATTTGTTGCTCAGCATGACATTTTTTATCCTCAACTATCAGTCAGTGAGACACTTGTCTTTTCTGCTCTTCTTCGCTTGCCAAACAGCCTCTCTAAAGAAGAGAAAATCTCAAATGTTCATGCAGTTATGAATGAGCTTGACCTGACTCATTGCAAGGACACTATAATGGGAGGGCCACTCCTAAAGGGTGTTTCAGGTGGAGAATGGAAGAGAGTTAGCATAGGACAAGAACTGTTAACTAATCCAAGTCTCTTGTTTGTTGACGAACCCACTTCAGGTCTTGACTCAACCACAGCTAGAAGAATTGTGCTAACTCTGTGTGAATTAGCTAAAGGTGGAAGGACTGTCATAATGACTATCCACCAGCCTTCTAGTAAACTCTTTTACATGTTTCAAAAGATTTTGCTGTTATCAGATGGTAATAGCTTGTACTTTGGGAAGGGAGAACATGTTATGAATTACTTCTCCAGTATTGGATATACTCCATCTGTAACCATGAATCCCACAGATTTCCTACTTGATCTTGCAAATGGTATGTATTCTGGAAATTCAGAAGAGGATACAAATGCTACAAAACAAGCGTTACTATCAGCTTTTGAGAGTAACCTTGCATGCCAAGTGAAGATGGAACTTCAGAGTTCCATGGTTTCATTTCATGACAGTTCTAAAGATGAGATATTTGGTCAATATTGCACAACTTGGTGGGAGCAGTTTACTATATTACTAAGAAGGGGTTTCAAAGAAAGAAAGTATGAGCAATTTTCAATCCACAAAATATGTCAGGTTTTGGCCTCATCAGTCTTCGCAGGCCTTCTCTGGTGGCAATCTAGAGTTGATCAAATGCAAAACCTGGTAGGACTACTTTACTACTATACACAATTCTGTGGATTCTTCCCTATGGTTCAGTCCATCTTTATCTTTCCTCATGATCGTGGAATGATAATAAAGGAAAGGTCTTCCTACATGTATAGACTCTCATCATACTTCATAGCAAGCAATGTTGTTGACCTTCCAGTGCAGCTAGCCTTGCCAACCCTTTTTGTCACCATTACTTATTGGATGGGTGGACTAAAAGCCAATGCTTTAATTTTCTTCCAAACTCTAGCTGTTGTTCTTCTCTATGCTTTGGTATCACAGGGTATTGGACTTGCTATTGGTGCACTTCTTGTAAATAATCAAAGGGCAGCTGCTACAGTTGGAGCAGTGGTCATGACATTATTTGTTCTAGTCAATGGCTACTTTGTTCAACACGTGCCAGCATTTGTATCTTGGATAAAGTGCATATCTCATAGCTATTATTCCTATAAGCTCTTGCTGGGGTCATACTTCAAGGATGATAACACTTACCCTTGTGGTCCAAATGTCACTTGCTCAGTTGGGAACTATCCTGCAATTAAGCATGTAGGCCTTGACAATCAAGGTTTCTCTGTTGTTGCCTTGGTGTTAATGCTTGTAGTCTACAGACTTATAGCCTACTTTGCCCTTATGATTTGCTTGAAGCAAAATTAG 1875 0.4016 MASEILNSVSQRLQSAEARRDIYVKVNPPVTLKFEDVVHKTKISKREGLFCKKEVSSEERLILKGVSGAVFPGELLAILGPSGSGKTTLLTALGGRLNDNTTRGSISYNGKPLSKSVKQNLGFVAQHDIFYPQLSVSETLVFSALLRLPNSLSKEEKISNVHAVMNELDLTHCKDTIMGGPLLKGVSGGEWKRVSIGQELLTNPSLLFVDEPTSGLDSTTARRIVLTLCELAKGGRTVIMTIHQPSSKLFYMFQKILLLSDGNSLYFGKGEHVMNYFSSIGYTPSVTMNPTDFLLDLANGMYSGNSEEDTNATKQALLSAFESNLACQVKMELQSSMVSFHDSSKDEIFGQYCTTWWEQFTILLRRGFKERKYEQFSIHKICQVLASSVFAGLLWWQSRVDQMQNLVGLLYYYTQFCGFFPMVQSIFIFPHDRGMIIKERSSYMYRLSSYFIASNVVDLPVQLALPTLFVTITYWMGGLKANALIFFQTLAVVLLYALVSQGIGLAIGALLVNNQRAAATVGAVVMTLFVLVNGYFVQHVPAFVSWIKCISHSYYSYKLLLGSYFKDDNTYPCGPNVTCSVGNYPAIKHVGLDNQGFSVVALVLMLVVYRLIAYFALMICLKQN* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02022 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 613 - -
Rops2g02022 624 CDD ABCG_EPDR 52 268 - -
Rops2g02022 624 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Rops2g02022 624 Pfam ABC-2 type transporter 358 565 IPR013525 GO:0016020|GO:0140359
Rops2g02022 624 Pfam ABC-2 type transporter 243 340 IPR043926 GO:0140359
Rops2g02022 624 SMART AAA_5 72 263 IPR003593 GO:0016887
Rops2g02022 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 286 IPR003439 GO:0005524
Rops2g02022 624 Gene3D - 51 280 IPR027417 -
Rops2g02022 624 Pfam ABC transporter 63 214 IPR003439 GO:0005524
Rops2g02022 624 FunFam ABC transporter G family member 22 50 280 - -
Rops2g02022 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 281 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02022 Rops-Chr2 32156905 32159847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02022 62 275 Calmodulin-binding Proteins AT2G36910 24.775 2.77e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02022 K05681 - gmx:100800295 982.63