Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02008 ATGTTTCTTACAACTAACAACGAAAGTCACCACACCAATCACCTTTCCGGCGGCATCTTCTTCTCCATCATCCTTCCGGCCTCATCACACCAATCACCGTTCAGTTTGTTGTTTCCGTTCACTGAACTATTCAGTGTGTCACTCCTAAACCAGTATCACGTTTCATTGAATCCACCACACCAGTCACCGTTTAGTCTTCTTCTCGGGATATATTGGCTATTCCGATTATCTCTTGTGTCTTACGAGGTCGCATTTATCTTTGGAGGCCGTGTTCTTGACCCGTACTGCAGCTCATTGAGTCCCATCACAGTTGAGGCTTTGATTTGCACTCAAAACTGGTTGAGGTCCAGTAAAGTGGTTGGTGATTCACAAATTCAAGCTAATGATGCAGCAGGAGAAATTGAATCAGAAAGCATTGGAAAAGGTGGTGGGAAGTTGGAAACAGTTTCCTTGGAAGAAATGGGTCGTGTGAATTTGGAGTTGCATTTGCAAATTTTGATAATGTCAGTGATGATTTTCGCTGGAACTTTCTGTGTTGGGGACACTGACCCTCTTGATGTTGCAGCAATCAATAGTTTGTATGTGGCTCTGAGATCACCTCCACTTCAAGGGTGGAAATCCACAGGAGGCGATCCATGTTTGGAAATGTGGCAAGGTGTGAGTTGTGTCTTCTCCAACATAACTGCCTTACAACTGGGAGGCATGAATTTAAGTGGAGAGCTGGGAAGTAATTTGGATTTCCCATCCATCATAGAAATGGATCTCAGCAACAACCAGATTGGAGGGACCATTCCATCCACTTTGTCCCCTACTCTAAGGAACTTGTCATTGTCGGCAAATCAGTTAACTGGAAGCATTCCAGATGCCTTATCCTCATTAACTCAATTGTCAGACTTGTCATTAGAAAATAACCTTCTGACTGGACAAATACCAAATGCATTTCTACAGCTCACTGGTTTGATGAATATGGATCTGTCAGGTAACAACTTGAGTGGTCAGCTGCCTCCCTCAATAGGGAATTTATCATCTCTGACCTCATTACACTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATCTATTCTCTGGGCCAATTCCTCCAAAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGGAATCCATTTAATACTACTATCATTCCATCACCTCCAGCTGCATCCCCTTCACCTGTTGCTATGGCTCCTTCCCCAGAAGAATCACCTTGGAAAGTGGCAAATAGTCCCTCTACTACCACGAAAGCACCAATGGCTGCAATTGCTAGGAGGTCTTTCAAAGCTAAAAGCATGGTTTGGATTGCTGGTGCAGGGTTCTTAATATTTATTGCATTAGGAGTTTGTCTTTTAATGTTGTGGTGCTTTAAGAAAAGACCAGGGGACAAAAATTATAAGAAACACAACATGGGTGGGTATGCAAGAACTTTGCATAAACATACGTGCAGTGACTCTTCTTTTGAAGCAACTAATGATGAGGAAAAAGAATGCAATAATGGGGGTGAATTAAACAATACAGGATGGGGTTCCAAACTTCCACCCCTGCAGCCAGCACCACCACATCCTCTCCCAATCATTCCTGGAGAAAAGTTCGTTATCAATCCAGCTATATCTACCAAAGAAACCGAAAGACAAATTATGACAAGTTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAGTACACCAATAGTTTTTCCCAAGAAAATTATATCGGGGAAGGTGCACTTGGACCTGCTTATAGGGCTGAGCTTCCTGATGGAAAGCTACTGGCAGTTAGGAAGTTGAAGGCTGCTGCTGCTTCCGTGGGGCAAAATCATGAACAGTTTCTTCAATTAGTGTCCAGTATCTCCAAAATTCAACATGATAATATTGTAAAGCTTATCGGCTACTGCACTGAGTATAGCCAACGACTACTTGTATATGAATATTGCAGCAATGGGACTCTACATGATGCACTGCATGCAGATGATATTAAACTTTCATGGAATGAACGCATTCAGATGTCACTTGGGGCTGCAAGAGCTTTAGAGTATCTGCATGAGCACTGCCAGCCGCCTATTGTACACCAAAATTTTAGCTCTGCTAATGTTCTCCTGAATGACAAGTTGGAAGTGTGTGTCTCTGATTGTGGATTAGGTTGTTTACTATCTACTGGTTCTGCTGGTCAGTTGTTCACAGCTAATGGTTACAGTGCTCCAGAATTTGAGTCTGGGAGTTATACACAACGAAGTGATGTCTTTAGTTTTGGAGTGGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCAAGGCCTCGTGGAGATCAATTTTTGGTCAGATGGGCAGTCCCTAAACTCCATGACATTGACGCATTGTCAAAAATGGTTGACCCTTCCTTAAATGGAGTGTATCCTATGAAATCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGCATGAACCTGAATTCCGGCCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAA 2574 0.425 MFLTTNNESHHTNHLSGGIFFSIILPASSHQSPFSLLFPFTELFSVSLLNQYHVSLNPPHQSPFSLLLGIYWLFRLSLVSYEVAFIFGGRVLDPYCSSLSPITVEALICTQNWLRSSKVVGDSQIQANDAAGEIESESIGKGGGKLETVSLEEMGRVNLELHLQILIMSVMIFAGTFCVGDTDPLDVAAINSLYVALRSPPLQGWKSTGGDPCLEMWQGVSCVFSNITALQLGGMNLSGELGSNLDFPSIIEMDLSNNQIGGTIPSTLSPTLRNLSLSANQLTGSIPDALSSLTQLSDLSLENNLLTGQIPNAFLQLTGLMNMDLSGNNLSGQLPPSIGNLSSLTSLHLQNNQLSGTLFVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAASPSPVAMAPSPEESPWKVANSPSTTTKAPMAAIARRSFKAKSMVWIAGAGFLIFIALGVCLLMLWCFKKRPGDKNYKKHNMGGYARTLHKHTCSDSSFEATNDEEKECNNGGELNNTGWGSKLPPLQPAPPHPLPIIPGEKFVINPAISTKETERQIMTSSIKVYTVASLQQYTNSFSQENYIGEGALGPAYRAELPDGKLLAVRKLKAAAASVGQNHEQFLQLVSSISKIQHDNIVKLIGYCTEYSQRLLVYEYCSNGTLHDALHADDIKLSWNERIQMSLGAARALEYLHEHCQPPIVHQNFSSANVLLNDKLEVCVSDCGLGCLLSTGSAGQLFTANGYSAPEFESGSYTQRSDVFSFGVVMLELLTGRKSYDSSRPRGDQFLVRWAVPKLHDIDALSKMVDPSLNGVYPMKSLSRFADIVSSCIQHEPEFRPAMSEIVQDLLRMM* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02008 857 Gene3D Phosphorylase Kinase; domain 1 549 663 - -
Rops2g02008 857 SUPERFAMILY Protein kinase-like (PK-like) 564 853 IPR011009 -
Rops2g02008 857 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 664 857 - -
Rops2g02008 857 Gene3D Ribonuclease Inhibitor 187 404 IPR032675 -
Rops2g02008 857 Pfam Protein tyrosine and serine/threonine kinase 588 853 IPR001245 GO:0004672|GO:0006468
Rops2g02008 857 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 183 408 - -
Rops2g02008 857 Pfam Leucine rich repeat 270 330 IPR001611 GO:0005515
Rops2g02008 857 MobiDBLite consensus disorder prediction 407 432 - -
Rops2g02008 857 SUPERFAMILY L domain-like 184 389 - -
Rops2g02008 857 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 226 853 - -
Rops2g02008 857 ProSiteProfiles Protein kinase domain profile. 585 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02008 857 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 553 663 - -
Rops2g02008 857 Gene3D Transferase(Phosphotransferase) domain 1 664 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02008 Rops-Chr2 31835572 31855520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02008 235 857 Strubbelig Receptor Gene Family AT1G11130 43.920 5.87e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops2g02008 PK_Tyr_Ser-Thr 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02008 - - gmx:100794130 1093.95