Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02005 ATGGTGATGGGAGCGAAGGTGATGGTGACATGGGGCACCTGGGAGGAGCTCCTCCTTGGTGGAGCCGTTCTAAGGCACGGGACCCGAAATTGGACCGTCGTCGCCGCGGAGCTCCGAGTCCGAACCATTTCTCCATGCACTTTCACACCCGAGGTATGTAAAGCCAAATATGAAGACTTGCAACAGCGCTATGCTGGATGCACGGCTTGGTTTGAAGAGCTTAGGAAGAAAAGAGTAGCAGAACTTAAAAAAGCTTTGGTGCTATCTGAAGATTCAATTGGGTTAGTTGCATGGGCTATCTTTCTCATGACGCTGAGATTTTGTGTGACAACAAAGTCTCTTGAATCAATGCTCGAATCCCTTAAGGCTGGGAAGAATGAGAAAGGAGATGATTGTCATGTTGACAATGGTTCAGTTGGACCAGAATTACATGTTCCTTCACAGAAATTGGAGAGAGTGGAATCTTCCACTAAAGAGATGACAAAGGATGGGCTATCTGCTGGGAGTTTCACTCATGAAACGCAGACAAAGTGGTCTAATGAATGCCAGGTTCCAGCAATGTCTTCTGAAGATATGGAGACAAAGCCTGAAGTAGGGTCTATTGAACAGGAAAAAGTTTTGAGTGTAGATAAGTTGGTACATAATATTCATGAAGGACAAGGAAGGAGTTTGAAAAAACGGAGAGGGAAGAGAAAGAGGAAGGATTGTTGTTGCAGGAACATTAATGAAGCAAGTGTAAGAGAAAGTGGCTTTTCAGCTGATGCGTCCCGGTGTAAAGAAAGTTCTACCAGCAACTGTGGTGAGGTTGCCAAATCTTCTGGTATAAATGAGCAGAATATGAACTTGAAAAAGGATGGAATAAAAGATATGATGGAGATTTTAGATTCTGTTTTGGAAGTTAAAGGTGTTTCTGCTTTCTCACGTAGACTTGATAGCCAGAAGCGAGGAAGGTACAAGAAAATAATCCGGCGGCACATGGACTTTAACACTATAAGGTCAAGAATTAACAGCCAAACAATTAAGTCAGCCATGGAACTGTTCAGAGACTTGTTGCTACTTGCTAACAATTCTCTTGTCTTCTACTCCAAGAACACTCGTGAACATAAATCTGCTCTACTGCTTAGAGACATGTTGACCAAAAAATTGAGGGAGAATACTGTCAAGTGTTTTAGCAGCAGTGTCACCAATGCTAACATCTCTATCACATTACCACCTGTTCATGAACCTCCTGTGAAAGTGAGAAGTGTACGCCCTGGTAATCGCAAGATTGTTGCAAAAGCAGCTGGTGGCAGCAATTCTGGTTCTGGGGTCTCACATGGAGCTAAGAAACTTGATTCTCCACCTTCAGTGGAATCATTACCCATTAAGAAATCTTTTGGTAGAACAAAAAAGCTTGGACATGAAACTGCAGGTAAGCCAATGAAGGAAAAGAAGAGAGGGAGAACAAAGTGA 1452 0.4304 MVMGAKVMVTWGTWEELLLGGAVLRHGTRNWTVVAAELRVRTISPCTFTPEVCKAKYEDLQQRYAGCTAWFEELRKKRVAELKKALVLSEDSIGLVAWAIFLMTLRFCVTTKSLESMLESLKAGKNEKGDDCHVDNGSVGPELHVPSQKLERVESSTKEMTKDGLSAGSFTHETQTKWSNECQVPAMSSEDMETKPEVGSIEQEKVLSVDKLVHNIHEGQGRSLKKRRGKRKRKDCCCRNINEASVRESGFSADASRCKESSTSNCGEVAKSSGINEQNMNLKKDGIKDMMEILDSVLEVKGVSAFSRRLDSQKRGRYKKIIRRHMDFNTIRSRINSQTIKSAMELFRDLLLLANNSLVFYSKNTREHKSALLLRDMLTKKLRENTVKCFSSSVTNANISITLPPVHEPPVKVRSVRPGNRKIVAKAAGGSNSGSGVSHGAKKLDSPPSVESLPIKKSFGRTKKLGHETAGKPMKEKKRGRTK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02005 483 Pfam Bromodomain 291 371 IPR001487 GO:0005515
Rops2g02005 483 SUPERFAMILY Bromodomain 285 384 IPR036427 GO:0005515
Rops2g02005 483 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 5 437 - -
Rops2g02005 483 Gene3D - 277 389 IPR036427 GO:0005515
Rops2g02005 483 SMART bromo_6 283 387 IPR001487 GO:0005515
Rops2g02005 483 MobiDBLite consensus disorder prediction 457 475 - -
Rops2g02005 483 CDD Bromodomain 287 382 - -
Rops2g02005 483 ProSiteProfiles Bromodomain profile. 306 368 IPR001487 GO:0005515
Rops2g02005 483 MobiDBLite consensus disorder prediction 426 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02005 Rops-Chr2 31796203 31800840 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops2g02005 Bromodomain 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02005 - - gmx:100804245 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02005 2 31796203 31800840 Rops11g00500 11 6813446 6818920 PCT