Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01968 ATGGGAAAAAAATCAGCGGCAACGAAAGAGGGAGAAGAGGAGGAGCCTCTGCCGGACCATCTCCGGTGCGGTCGCACCGACGGTCGGCAATGGCGGTGCCGGCGGAGAGTGAAGGATAATCTGAAGCTTTGTGAGATTCACTACCTTCAAGGTAAGCATCGACAGTATAAGGAGAAGGTTCCAGAGTCTCTGAAGCTTCAGAGGAAGCCGAAGAAGAAGAATGAAACTTCCGTTGTCAACAATGTCGAAATTAGGGCACGGAAAGTGTGCAAAATGGCGATTAAGAACAAGAGGAAGCGGAAGCTTCCAGAAGGTTCTGAGGCATTGGTTGATGCTGTGCAGAAGAAGAAGAAGAAGAAGGCATTGAAGCAAGGTGATATGCAGTTGGAGCTGATAAGGATGGTTCTCGAGAGAGAGGTTGAGAAGAGAAAGAGGAACAACAACAACAATAACAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGGAGAAAAAAGAAGAAGCGGGAGAGGAATTGCATTACAGTGAAGGTGAATTGAGGAGGGAATTACCCAATGGTGTTATGGAAATATCTCCAGCTTCAACACCTCATGATTACACCAATGTGGGTTCCCATTGTGATGTGAAAGTGGGTGTTGATCATAAAACTGTTACACCTCGTTACTTCAGGTCCAAGAATGTTGACAGAGTCCCTGTTGGCACGTTGCAAGTTGTGCCATATGGATCAAACTTGAAGAAGGGTAACATTAAGAGGAACAAGTGTCATTGGTGCCAGAGAAGTGATTCTTGGAGTCTCATCAAGTGTTCGAGCTGTCAGAAGGAGTTTTTCTGCATGGATTGCATTAAAGAGCGGTATTTTGACACTCAAAATGAAGTTAAGAAGGCATGTCCAGTTTGTCGAGGAACTTGCACTTGTAAGGACTGCTTGGCAAGTCAATGTAAAGACAGTGAAAGTAAGGCATATTTTGCTGGTAAAAGTAGAGTTGACAAAATATTGCATTTTCATTATTTGATCTGCATGCTCCTTCCAGTACTAAAGCGAATAAGTGAAGACCAGGATACTGAGCTAGAAGCAGAAGCAAAAATTAAAGGGAAAACTATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGCTGCAATGAGAAGAATTATTGTAATCACTGTAAAACACCTGTCTTGGATCTCCATAGAAGCTGCCCTAGTTGTTCATATAGCCTATGCTTAAGTTGTTGTGAGGAATTAAGTCAAGGAAGAACTTCTGGAGAAATTAACTCACCTATGTTCAAGCTACCTGATAAATTGAAAACTTGTGATGCCAGTGAGAGCCATACTTTGGATCAAAAGGCCGTTTCTAGTGGCAATTTAACTGCTACTTCAATATTGCCTGAGTGGACAAATTGTAAAGGTATTGATAGTGTATCATGCCCTCCTACAGAGCTTGGTGGTTGTGGTAATAGCCACCTTGATTTGAGATGTGTTTTTCCCTCTAGTTGGATCAAAGAGATGGAAGTCAAGGCAGAAGAAATTGTTTGCAGCTATGACTTCCCTGAAACTTTGGATAAAAGTTCAAGCTGCTCACTGTGTGTTGACACCAATCACAATACTAACAGATATAAGCAGTTGCAAAAAGCAGCTCTAAGAGAAGATTCAACAGACAATTGCTTGTTTTGTCCCACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACACTGGGGAAAAGGCCATCCTATAGTCGTCCGAGATGTGCTCCAGAATACGTCGAACCTAAGTTGGAATCCACTGATCATGTTCTGTAATTATCTCGAGCAGAGCATTACAAGATATGAGAATAATAAAGACTTACTTGAATCTTGTTTGGATTGGTGTGAGGTGGAAATCAACATTAGGCAGTATTTTACTGGGTCTCTCAAATGTCATCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTAAGGGGGTGGCTGTCTTCCCAAATATTCAAAGAGCAGTTTCCAGCTCATTTTGCTGAGGTAATTGATGCTCTACCGGTTCAAGAATATATGAATCCCATGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCACATGGGAGTGCAAAACATGACATTGGGCCACATGTCTATATTTCATATGGCTGTGCCGACAAAGAAGCTGATTCTGTGACAAAACTCTGCTATGACTCATATGATGTGGTTAATATTATGACACATACTACAGACATGCCCCTCTCTACAGAACAGCTTACAAAAATAAGAAAATTACTGAAAAAGCACAAAGCTATGTGTCAAATGGAGTCTGTTGCTACTGAGCAGCTACAGGAACAGGAAGTGAAAGGAATGACATTGCATGCTGAAGAAATGGAAAAAAAAGGCTTGCAGAGTATGGTGAAGGGAGGAATGGACTTTTTCAGGAGAGTCAATAGAACATCTTACATCTCAACTGAAGCTAAAAAAGCTGCTAGTCAGAGCATAGACAGCAAGATTTCCCGGGATGGAGAATGTGATTTCTTTTCTGATTCCGATTCCAAACCCTCTTTACTTCCACATGGGACTGTTCAAACCATTGAATCATATTCACATGATAATCCTAGAAATCCCTTTGAAAGTTCAAACAGTGATAAAAATAAGTTTACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGTAGACAAGATGTACCAAAGCTCATAGAATACCTTAAAAGACACTATGATGAATTTTCGTATACCCATGACTATGACAAGAAGATGGTTCATCCGATTCTAGATCAGAACATTTTTCTTGACAGTACTCACAAAATGAGACTTAAGGAGGAGTTTAAGATTGAACCATGGACTTTTCAGCAACATGTTGGAGAAGCTGTAATCATTCCTGCTGGATGTCCATACCAAATAAGGAATCCTAAGTGTTGTGTTCATGCAGTATTGGAATTTGTGTCCCCTGAAAATGTTACCGAGTGTATCCAGTTGATTGATGAAATCCGACTATTACCTGAAGACCATAAAGCAAAAGTAGACAAGCTGGAGGTGAAGAAAATGGCGCTTCATAGCATGGGTACAGCAATTAAAGAAATTCATCAGCTTACATGCAAAACATGA 3108 0.4086 MGKKSAATKEGEEEEPLPDHLRCGRTDGRQWRCRRRVKDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKPKKKNETSVVNNVEIRARKVCKMAIKNKRKRKLPEGSEALVDAVQKKKKKKALKQGDMQLELIRMVLEREVEKRKRNNNNNNKKKKKKKKKKEKKEEAGEELHYSEGELRRELPNGVMEISPASTPHDYTNVGSHCDVKVGVDHKTVTPRYFRSKNVDRVPVGTLQVVPYGSNLKKGNIKRNKCHWCQRSDSWSLIKCSSCQKEFFCMDCIKERYFDTQNEVKKACPVCRGTCTCKDCLASQCKDSESKAYFAGKSRVDKILHFHYLICMLLPVLKRISEDQDTELEAEAKIKGKTISDIQIKQVEFGCNEKNYCNHCKTPVLDLHRSCPSCSYSLCLSCCEELSQGRTSGEINSPMFKLPDKLKTCDASESHTLDQKAVSSGNLTATSILPEWTNCKGIDSVSCPPTELGGCGNSHLDLRCVFPSSWIKEMEVKAEEIVCSYDFPETLDKSSSCSLCVDTNHNTNRYKQLQKAALREDSTDNCLFCPTVLDISGDNFEHFQKHWGKGHPIVVRDVLQNTSNLSWNPLIMFCNYLEQSITRYENNKDLLESCLDWCEVEINIRQYFTGSLKCHPQRNTWHEMLKLRGWLSSQIFKEQFPAHFAEVIDALPVQEYMNPMSGLLNLAANLPHGSAKHDIGPHVYISYGCADKEADSVTKLCYDSYDVVNIMTHTTDMPLSTEQLTKIRKLLKKHKAMCQMESVATEQLQEQEVKGMTLHAEEMEKKGLQSMVKGGMDFFRRVNRTSYISTEAKKAASQSIDSKISRDGECDFFSDSDSKPSLLPHGTVQTIESYSHDNPRNPFESSNSDKNKFTEHSGAQWDVFRRQDVPKLIEYLKRHYDEFSYTHDYDKKMVHPILDQNIFLDSTHKMRLKEEFKIEPWTFQQHVGEAVIIPAGCPYQIRNPKCCVHAVLEFVSPENVTECIQLIDEIRLLPEDHKAKVDKLEVKKMALHSMGTAIKEIHQLTCKT* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01968 1035 MobiDBLite consensus disorder prediction 859 881 - -
Rops2g01968 1035 MobiDBLite consensus disorder prediction 162 176 - -
Rops2g01968 1035 SUPERFAMILY Clavaminate synthase-like 566 1021 - -
Rops2g01968 1035 ProSiteProfiles JmjC domain profile. 686 998 IPR003347 -
Rops2g01968 1035 Coils Coil 143 170 - -
Rops2g01968 1035 Gene3D Cupin 557 1007 - -
Rops2g01968 1035 ProSiteProfiles Zinc finger RING-type profile. 253 299 IPR001841 -
Rops2g01968 1035 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 1033 IPR045109 GO:0032454|GO:0033169
Rops2g01968 1035 ProSiteProfiles WRC domain profile. 17 63 IPR014977 -
Rops2g01968 1035 MobiDBLite consensus disorder prediction 147 161 - -
Rops2g01968 1035 Pfam JmjC domain, hydroxylase 884 976 IPR003347 -
Rops2g01968 1035 MobiDBLite consensus disorder prediction 141 176 - -
Rops2g01968 1035 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g01968 1035 SMART cupin_9 667 998 IPR003347 -
Rops2g01968 1035 Pfam WRC 18 59 IPR014977 -
Rops2g01968 1035 MobiDBLite consensus disorder prediction 859 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01968 Rops-Chr2 31137287 31143350 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Rops2g01968 JmjC 1.1e-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01968 K15601 - gmx:100810673 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01968 2 31137287 31143350 Rops11g00465 11 6265566 6271260 PCT