Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01967 ATGGCGTCACTCTCACAGTACCAACACGACTTAGACGCCGATTCAGTAGCCTCTTCCCCTCGCTCCGATCACTTCCACGATGCACCACCACGTGTCCGTTTCATGTGCTCCTTCGGCGGCAAGATCCTCCCTCGCCCCCACGATAATCAACTCCGATACGTCGGCGGCGACACCCGAATCACCGCCGTTCACCGCTCCATCACTTTCTCCGCCCTCATCCTCAAACTCTCTAAACTCTCAGGCATGAGTAACGTAACGGCGAAGTACCAGCTTCCCAACGAGGATCTCGACGCGTTGATTTCAGTTACAACAGACGAAGATGTGGAGAACATGATGGATGAGTACGACCGCGTCGCACAGAATCAAAACCCGCGATCGGCTCGGCTTCGGCTTTTTCTATTCCCCGAAGGTGAAGATTCTCGAGCCAGCAGCATCACTTCACTTCTAAACGGCTCAGCCAATCGCGAGAACTGGTTCCTCGACACCTTAAACGGCGGCGTTTCGGGGCTCGAGCGAGGCCGCTCTGAAGCTTCTTCTATGGTTTCGGAAGTACCCGATTATCTCTTCGGGTTGGATAACTCCGAAGAATCACACCACCGTGAACCACGACCCAAGGACCGACCCGTTCTCCATGATAACGTTTCCCATTCGGATCCGGGTTCTCCTGCCCCGGTTGTATCCTCCCCGTTTTGTTCCACGTCATCAGCACTTTGCGTGCCCACTCTCCCGAACCTTCCACCTGTTAAAACCAAACCCGAATACCCGGTTCCTGAGACGGAGTACAAGGATAATCAAATTGAAGCTGAAACGGGTGGGCAACCGAACCCGAATCTACACCAGAGTAACGCTGTACTACACTACCCCCCAGAAGGCGCTTATTCGGGTCATTCTGCAGCACCGGTTCCGGTTTTCTATGTTTCGGGTCCGGTTCATCCCGGAACTGTACCAGTCCAACCGGTTCATATGCAAGCACCCTATCACTTCGCTCAACAACCATATCATGCAGTGATGCCAGCTCAGGTTCCAATGGGGTACCATCATTTGGTTCCGGGTCCGGGTTCGGGTCAAATATATAGTGCAGGGGTGAGGCATGTTACCCCAGTGCATCACCCATACAGTCCCTCGGCGGCAATGGTTCACGACGGGTTGAAACAGCAGGTGTTTCAAGCCGTGCCGAATTCCGGTGCGGTTCCGGTATACCCGACGATGGCAATGACCGGTGGGGATGACCCGCAGAGAGGTGGAGCGGAGTTTGGGGCGGGTCGGGCACCAACTCAATGA 1281 0.548 MASLSQYQHDLDADSVASSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRITAVHRSITFSALILKLSKLSGMSNVTAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRASSITSLLNGSANRENWFLDTLNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEESHHREPRPKDRPVLHDNVSHSDPGSPAPVVSSPFCSTSSALCVPTLPNLPPVKTKPEYPVPETEYKDNQIEAETGGQPNPNLHQSNAVLHYPPEGAYSGHSAAPVPVFYVSGPVHPGTVPVQPVHMQAPYHFAQQPYHAVMPAQVPMGYHHLVPGPGSGQIYSAGVRHVTPVHHPYSPSAAMVHDGLKQQVFQAVPNSGAVPVYPTMAMTGGDDPQRGGAEFGAGRAPTQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01967 426 MobiDBLite consensus disorder prediction 193 226 - -
Rops2g01967 426 PANTHER OS05G0427100 PROTEIN-RELATED 13 355 - -
Rops2g01967 426 MobiDBLite consensus disorder prediction 1 15 - -
Rops2g01967 426 MobiDBLite consensus disorder prediction 407 426 - -
Rops2g01967 426 Gene3D - 52 135 - -
Rops2g01967 426 SUPERFAMILY CAD & PB1 domains 47 143 - -
Rops2g01967 426 MobiDBLite consensus disorder prediction 193 213 - -
Rops2g01967 426 CDD PB1_UP2 35 134 - -
Rops2g01967 426 SMART PB1_new 46 136 IPR000270 GO:0005515
Rops2g01967 426 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g01967 426 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Rops2g01967 426 Pfam PB1 domain 47 135 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01967 Rops-Chr2 31122785 31124341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01967 26 171 MAP Kinase Kinase Kinase AT5G57610 43.836 6.38e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01967 - - aprc:113858359 718.383