Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01965 ATGGGCATGATTATCAGATTCAAAGTTTCACTTTTTCTGTTGTCCTTCTTCTATGCCCTCTGTTTTCATTCTCTGTTTTTGCATGCAGCCAACTCCATCACACAGCATGAGTCGATCAAAGATGGTGATGGTGTCACTTTGGTGTCAGAAGGTCTCAACTTTGAAATGGGTTTCTTCGGTTTTGATAACTCTTCTTCAAGATATGTTGGAATTTGGTACTACAAGGTTCCAAGTTCAGCATACGTGTGGGTTGCAAATAGAGAAAAACCCATCAAAGGAAGAGAAGGGGTTATCACAATAAAAAATGATGGCAACTTGGTTGTTCTTGATGGAGAGAACAATGAGGTGTGGTCAAGTAACGTGTCAATTCCAATGAACAACTCACAAGCTGTTCTTCAAGATGATGGAAACCTTGTTCTTTCAGAAAATGGTAAAGAGGTGTGGAAAAGCTTTGAGGATCCAACTGATACATATCTGCCAGGTATGAAAGTGCCAGTTGGTGCTGGAATGGGGAATGACCCTACCTTTTGGTCATGGAAATCAGCAACGGATCCTTCATTAGGAAACTACACAATGAGGGTTGATGAATCACCACAGATAGTGATTTTTGAGGGAGAGAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGTAGAATATTCACAGGTGTGTTCAATATGACAGGAAGCTATCTTTATGGTTTTAGACTTAACACGGATGATGATGGAGGAAGGTATTTTATATATGACAAATTGAATAACACTGATAAGATAAGGTTTCAGATAGGTTGGGATGGATATGAAAGGCAATTTAGGTGGAATGAAGGTGAGAAACAGTGGAATGTGATACAAAGTCAGCCTAATTATGAGTGTGAGTTTTATAATTTCTGTGGCAGTTTTGCAGTATGTGATTTGTCTAATTCAGCTAGATGTAGTTGCATACAAGGGTTTGAACCAAGACTTAATGATCAGTGGAATAGAGGGAATTGGTCAGGGGGGTGTAAGAGGGTGACTCCATTGAAGGCTGAAAGAGCTAATAGTTCTGGAGAAGATGGTTTCTTGGTGCAAAGGAATTTGAAGTTGCCGGATTTTGCAAGTGTTGATGATGCTGAGGACTGTGAGCGCAATTGTCTGCAGAATAGTTCTTGTACTGCATATGCAAATACTATTGGAATTGGGTGCATGATTTGGTATGGGGAGTTGGTTGATGTTCAACACTTTGAAAATTTTGGAAATACACTAAACATCCGTCTTGCTGAGTCTGACTTAGGTGATGGGGAGAAAAAGACCAAGATTTGGATAATATTAGCTGTTGTGGTGGGGCTGATCTGCCTTGGAATCTGTGTCTGGCTGGTATGCAGGTTTAAGGGAAAACTCAAAGTTTCCTCAGCTTTTTGTTCCAACAATAGTGATGTACCAATCATTGAACCAACCAGGAGTACAGACTTATCAGCAGAATTTTCAGAATCAGCTGACCTTAGCTTGGAACAGAATCAACTAAGTGGAGCAGAACTTCCACTGTTCAGTTTTAGTAGCATTGTAATAGCAACAAACAATTTCTCAGAAGAAAATAAGCTTGGACAAGGGGGATTTGGTCCAGTCTACAAGGGAAAGCTAGGGGAAGAACAAATAGCTGTCAAGAGGCTTTCAAGACGGTCTAGTCAGGGTTTAGAGGAGTTCAAGAATGAAATGATGCTAATAGCCAAATTACAACATAGAAATCTGGTTAGACTATTGGGATGTTCCATTCAAGGGGAAGAAAAGTTACTGGTATATGAATACATGCCAAACAAGAGCTTGGACTGCTTTCTATTTGATCCGGTCAAGCAAACAAAACTAGACTGGACTAGACGTTTTGAAATCATTGAGGGCATTGCAAGAGGGTTACTTTATCTGCACCGAGATTCAAGACTTAGAATAATTCATCGAGATCTAAAAGCAAGCAACATTCTATTGGACGAAAACATGAACCCAAAAATTTCAGACTTTGGCTTGGCTAGAATATTTGGGGGAAACCAGAATGAAGCCAATACAACTAGAGTGGTCGGTACATATGGCTATATGTCACCAGAATATGCAATGGAAGGACTATTTTCAGTCAAATCTGATGTCTATAGTTTTGGTGTATTACTACTAGAGATTGTGAGTGGCCGCAAGAACACTAGCTTTCGTCACTCAGATGACTCCAGTCTCATAGGATATGCGTGGCGTCTTTGGAGTGAAGAGAGAGTAATTGAGCTTGTTGATCCTTCCATCCGTGATTTAAGTCCAAAGAGTAAATGTTTGAGATGCATTCACATAGGGATGTTATGTGTGCAAGATTCAGCAACTCATAGACCAAACATGTCCTCTGTGGTGCTGATGCTGGAAAGTGAAGCAACAACTCTTCCTTTGCCTAGGCAACCTTTGCTTACTTCCATGAGGAGATATGTAGATAGAGAATCTCATACCGAAGGCCTTGATGTGTCAAATGATTTAACAGTTACTATGGTGACAGGAAGATAG 2502 0.4033 MGMIIRFKVSLFLLSFFYALCFHSLFLHAANSITQHESIKDGDGVTLVSEGLNFEMGFFGFDNSSSRYVGIWYYKVPSSAYVWVANREKPIKGREGVITIKNDGNLVVLDGENNEVWSSNVSIPMNNSQAVLQDDGNLVLSENGKEVWKSFEDPTDTYLPGMKVPVGAGMGNDPTFWSWKSATDPSLGNYTMRVDESPQIVIFEGEKRRWRSGYWDGRIFTGVFNMTGSYLYGFRLNTDDDGGRYFIYDKLNNTDKIRFQIGWDGYERQFRWNEGEKQWNVIQSQPNYECEFYNFCGSFAVCDLSNSARCSCIQGFEPRLNDQWNRGNWSGGCKRVTPLKAERANSSGEDGFLVQRNLKLPDFASVDDAEDCERNCLQNSSCTAYANTIGIGCMIWYGELVDVQHFENFGNTLNIRLAESDLGDGEKKTKIWIILAVVVGLICLGICVWLVCRFKGKLKVSSAFCSNNSDVPIIEPTRSTDLSAEFSESADLSLEQNQLSGAELPLFSFSSIVIATNNFSEENKLGQGGFGPVYKGKLGEEQIAVKRLSRRSSQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDCFLFDPVKQTKLDWTRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTTRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWRLWSEERVIELVDPSIRDLSPKSKCLRCIHIGMLCVQDSATHRPNMSSVVLMLESEATTLPLPRQPLLTSMRRYVDRESHTEGLDVSNDLTVTMVTGR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01965 833 Gene3D Transferase(Phosphotransferase) domain 1 594 795 - -
Rops2g01965 833 Pfam D-mannose binding lectin 81 180 IPR001480 -
Rops2g01965 833 SMART blect_4 38 154 IPR001480 -
Rops2g01965 833 ProSiteProfiles PAN/Apple domain profile. 333 418 IPR003609 -
Rops2g01965 833 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Rops2g01965 833 ProSiteProfiles Protein kinase domain profile. 519 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01965 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 796 - -
Rops2g01965 833 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Rops2g01965 833 SMART ntp_6 347 417 IPR003609 -
Rops2g01965 833 SUPERFAMILY Protein kinase-like (PK-like) 504 811 IPR011009 -
Rops2g01965 833 CDD STKc_IRAK 525 789 - -
Rops2g01965 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 185 IPR036426 -
Rops2g01965 833 Gene3D - 25 151 IPR036426 -
Rops2g01965 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 484 593 - -
Rops2g01965 833 CDD PAN_AP_plant 347 418 - -
Rops2g01965 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Rops2g01965 833 SMART serkin_6 519 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01965 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 779 - -
Rops2g01965 833 CDD B_lectin 42 154 IPR001480 -
Rops2g01965 833 Pfam Protein tyrosine and serine/threonine kinase 522 786 IPR001245 GO:0004672|GO:0006468
Rops2g01965 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 151 - -
Rops2g01965 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Rops2g01965 833 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Rops2g01965 833 Pfam PAN-like domain 347 403 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01965 Rops-Chr2 31094198 31098672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01965 488 801 Receptor kinase-like Gene Family AT4G23140 59.627 1.39e-130 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01965 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01965 - - cam:101504189 1340.48