Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01958 ATGCTTTCTGATCTTATTACCGTTTATGCAAAAGGTGGGAAGACTATTGTTTTCACGCAGACGAAAAGAGATGCTGATGAGGTATCATTGTCATTAACAAATAGTATAGCTTCTGAAGCACAGCATGGTGATATCTCTCAACATCAGAGAGAGAGAACGTCGGATGGTTTTCGGCAAGGGAAATTCACAGTGCTTGTTGCCACTGATGATGCTGCTCGAAACTCTACTTCGTGA 234 0.4188 MLSDLITVYAKGGKTIVFTQTKRDADEVSLSLTNSIASEAQHGDISQHQRERTSDGFRQGKFTVLVATDDAARNSTS* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01958 77 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 73 IPR027417 -
Rops2g01958 77 Gene3D - 1 74 IPR027417 -
Rops2g01958 77 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 2 73 - -
Rops2g01958 77 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 77 IPR001650 -
Rops2g01958 77 Pfam Helicase conserved C-terminal domain 4 73 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01958 Rops-Chr2 30924800 30925033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01958 14 73 Eukaryotic Initiation Factors Gene Family AT3G19760 32.787 6.84e-06 40.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01958 - - qsu:111997698 130.954