Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01953 ATGAGTTTAAGGGGGAATGGGAAAAGACCAAATCAGAAGTGGATATCTCAACTAAAAACACTGTTTCTCTCAGATGACACAGGGTTTGGAAGTGGTCTTCACAATAATACAGCTAAGGCTGTAGGCATTATGGTTGGTGGTGCAGCTTTTATACTTTTGGCATTGGGTATCTATTTCTTATGGAAGAAGAGGAAATTGCAATGTATATTGAAAGGGAAAACTGGACACAGAGGTTCTATGGAAAGAAGTCAGGATTTGCTAATGACTGAGGTGGTGTTTTCAAGTAATAGGGAACAGTCAGGTGAAAGGAACTTGGATGAACTAGAATTGCCATTGTTTGATTTTAATACCATATCAATGGCTACAAACAACTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTAGTGTTTATAAAGGCAGGTTAATGGAAGGTCAGGAAATTGCTGTGAAGAGATTGTCAAAAAACTCTGGGCAAGGTGTTGAAGAATTTAAGAATGAAGTCAAGTTAATTGCCAAACTTCAACATCGAAATCTTGTTCGGCTACTTGGTTGCAGCATTCAGATAGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTGTTTAACAAAGCAAAAAGATCCTCACTGGACTGGAAAAGGCGCTTCAACATTATAGGTGGAATAGCTAGAGGGCTTCTTTATCTTCACCAAGATTCCAGATTTAGGATCATCCATAGGGATCTTAAGGCAAGCAACATTTTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGGTACGGATCAGACAGAAGCAAATACAGTGAGAGTTGTTGGAACATATGGCTATATGTCCCCTGAATATGCTATGGATGGGATCTTCTCAGTGAAATCTGATGTTTTTAAGTTTTGGGGTTCTTGTGCTGGAGATTATAAGTGGAAAAAAGAACAGAGGGTTCTATTATGCAAACAAGGAATTGAATCTTCTGGGGCATGCATGGAAGCTGTGGAAAGAAGGAAATGCATTGGAACTGATTGA 1068 0.3867 MSLRGNGKRPNQKWISQLKTLFLSDDTGFGSGLHNNTAKAVGIMVGGAAFILLALGIYFLWKKRKLQCILKGKTGHRGSMERSQDLLMTEVVFSSNREQSGERNLDELELPLFDFNTISMATNNFSEENKLGQGGFGSVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIAKLQHRNLVRLLGCSIQIDEKMLVYEYMENRSLDAILFNKAKRSSLDWKRRFNIIGGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFKFWGSCAGDYKWKKEQRVLLCKQGIESSGACMEAVERRKCIGTD* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01953 355 Pfam Protein tyrosine and serine/threonine kinase 128 313 IPR001245 GO:0004672|GO:0006468
Rops2g01953 355 SUPERFAMILY Protein kinase-like (PK-like) 106 311 IPR011009 -
Rops2g01953 355 SMART serkin_6 125 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01953 355 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 201 292 - -
Rops2g01953 355 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 90 200 - -
Rops2g01953 355 Gene3D Phosphorylase Kinase; domain 1 99 200 - -
Rops2g01953 355 Pfam Receptor serine/threonine kinase 81 115 IPR022126 GO:0004674
Rops2g01953 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Rops2g01953 355 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 43 313 - -
Rops2g01953 355 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Rops2g01953 355 ProSiteProfiles Protein kinase domain profile. 125 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01953 355 Gene3D Transferase(Phosphotransferase) domain 1 201 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01953 Rops-Chr2 30750806 30753376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01953 113 313 Receptor kinase-like Gene Family AT4G23230 69.652 3.18e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01953 PK_Tyr_Ser-Thr 5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01953 - - gmx:106799702 494.197