Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01952 ATGAAATTCAGCACCAGAGGGAAACCACAGTTGTTTGTGTATAACCACAACCTTCCCTGGTGGCGAGGTGGATCATGGAATGGGGAATTGCTTAAGGGGATACCCAATATGAAACGAGATATGGCCACTTTTAATGTTTCTTTTGAGGAAGATGACAATTATGTAGCACTCTCGTATAACATGTTTGATAAGTCTATTGTCACCAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAGACATTCACGTGGGATAACCAAAAGAGTCAATGGAACCGGTACTGGTCAGAACCAACAAATCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAATTGTGACCCTTTGAACTTTGAGGACTTTCAGTGTACTTGTCTACCTGGATTTGAACCCAAATTCCCACGTGATTGGTATGAGAATAGAGATGCCTCAGGAGGGTGTGTGAGGAAGAAAGGTGCATCCGTTTGTGGGAATGGAGAAGGTTTTGTCAAAATTGAAGGCCTAAAGGTTCCTGATACATCTGTGGCAATTGCCAAAAGGGGCTTGAGTTTGGAAGAATGTGAGCAGGAATGCTTGAGAAACTGCTCTTGTACTGCCTATGCAGTTGCTGAGGTGAGGAATGGAGGAAGTGGATGTTTAGCATGGCATGGGAATTTAAATGACACGCAAAAACTAAGTGATCAAGGCCAAGATTTATTTGTACGTGTTGATGCAGTTGAACTAGCCAATTACAACAAAAAAAGTAAGGGAGTACTTAGTAAAAAGAAGATGGTTGCAATTCTGGTAGCTTCTATACTTGCAATAGTCCTTCTCCTCTCCTGTGTGTCTTACCTGTGGAAGATAAAAAGAAAGGATAAAATGATGCAGCATTTAAATCGAGACTCCACTAGAGAAGAGAATGATGTTCAAAGCAGCATACACCCGAATCTTCCTTTTTTCAGCTTTAAAATGATAATGGCAGCCGCAAGAGATTTTGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGCTGCCTAGTTAATGGACTAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTTACACTACTGGTTAAACTCCAATACAGAAATCTCGTGAGGTTGCTCGGTTGTTGCCTTGAAAAGGAAGAAAGGATGCTAGTTTATGAATGCCTACCAAACAAAAGCTTGGACTTCTTCATATTCAATAAAAACCAAAGGTCATCATTAGATTGGGGTAAGCGTTTTGAAATTATTTGTGGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGACTCAAGGTCAAAAATAATTCACAGAGATCTAAAAGCCAGCAACGTTCTCCTTAA 1377 0.4031 MKFSTRGKPQLFVYNHNLPWWRGGSWNGELLKGIPNMKRDMATFNVSFEEDDNYVALSYNMFDKSIVTRIVVQQSGFFQTFTWDNQKSQWNRYWSEPTNQCDNYGTCGSNSNCDPLNFEDFQCTCLPGFEPKFPRDWYENRDASGGCVRKKGASVCGNGEGFVKIEGLKVPDTSVAIAKRGLSLEECEQECLRNCSCTAYAVAEVRNGGSGCLAWHGNLNDTQKLSDQGQDLFVRVDAVELANYNKKSKGVLSKKKMVAILVASILAIVLLLSCVSYLWKIKRKDKMMQHLNRDSTREENDVQSSIHPNLPFFSFKMIMAAARDFGHENKLGQGGFGSVYKGCLVNGLEIAVKRLSKDSGQGTEEFKNEVTLLVKLQYRNLVRLLGCCLEKEERMLVYECLPNKSLDFFIFNKNQRSSLDWGKRFEIICGDCSRCFISSSRLKVKNNSQRSKSQQRSP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01952 458 ProSiteProfiles Protein kinase domain profile. 325 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01952 458 SMART ntp_6 157 236 IPR003609 -
Rops2g01952 458 ProSiteProfiles PAN/Apple domain profile. 156 237 IPR003609 -
Rops2g01952 458 CDD PAN_AP_plant 157 236 - -
Rops2g01952 458 Pfam PAN-like domain 156 222 IPR003609 -
Rops2g01952 458 Gene3D Hepatocyte Growth Factor 154 234 - -
Rops2g01952 458 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 428 - -
Rops2g01952 458 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 288 400 - -
Rops2g01952 458 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Rops2g01952 458 Pfam Protein tyrosine and serine/threonine kinase 328 417 IPR001245 GO:0004672|GO:0006468
Rops2g01952 458 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Rops2g01952 458 Pfam S-locus glycoprotein domain 21 133 IPR000858 GO:0048544
Rops2g01952 458 ProSiteProfiles EGF-like domain profile. 97 135 IPR000742 -
Rops2g01952 458 SUPERFAMILY Protein kinase-like (PK-like) 299 429 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01952 Rops-Chr2 30730183 30734023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01952 245 444 Receptor kinase-like Gene Family AT4G23190 48.276 1.70e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01952 PK_Tyr_Ser-Thr 9.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01952 - - tpra:123914661 714.916