Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01950 ATGCACTCTGCTACAAATCTTCTCTGGCTTTTCATGGACCAAAATAATGAACATAAGTTACATACCAATTGGCTACTTAACACTTTGATGCTACTCCTTCTCAGCTTCTCAGTTTGCTCTTGTTCTGATACTATATCTACTGACAAACCCCTCAGAGATGGTGAGCTTCTTGTTTCTAAAGCTAAAACGTTTACTCTTGGTTTCTTCAGTCCAGGCAAGTCCACCTCCCGCTATGTTGGAATTTGGTACAATTTGCCGATTCAAACTGTTGTTTGGGTTGCAAACAGAGATAGTCCCATTAATGACACCTCTGGGGTTCTCTCAATCAACCCAGAAGGAAATCTAGTACTCCACCACAACTTTAGCACCATTCCCATATGGTCTACCAATGTTTCAGCCACCCAATCAAATAGCAATACCAATGTTATAGCTCAACTCTCAGATATAGCAAACCTTGTTCTGATTCTGAACAATACCAAAACTGTCATCTGGCAAAGCTTTGATCATCCCACAGACACTTTGCTCCCAGATATAAGGCTAGGTTTTGACAGAAGAACTAACCAGAACTGGTTCATCGAATCCTGGAAGACTGATGATGACCCAGGAGCAGGCGCTTTCACATTGAAATTCAGCACCAGAGGGAAACCACAGTTGTTTGTGTATAACCATAACCTTCCCTGGTGGCGAGGTGGATCATGGAATGGAGAATTATTAATTGGTGTACCCAATATGAAACGAGACACGGCCACTTTTAATGTTTCTTTTGTGGAAGATGACAACCATTTAGCACTCTCATATAACATGTTTGATAAGTCTATTATCCCAAGGATAGTAGTTCAGCAATCAGGTTTCTTTCAAATATTCACGTGGGATAACCGAAAGAGTCAATGGAACCGGTACTGGTCAGAACCAACAGATCAATGTGATAACTATGGAACCTGTGGTTCTAACAGTAACTGTGACCCTTTGAACTTTGAGGATTTCAAGTGTACTTGCCTACCAGGGTTTGAACCCAAATTCCCTCGTGATTGGTATGAGAACAGAGATGGTTCAGGAGGGTGTGTGAGGAAGAAAGGTGCATCCGTTTGTGGGAATGGAGAAGGGTTTGTCAACATTGAAGGCCTGAAGATTCCTGATACATCTGTGGCAATTGTCAAAATGGGTTTGAGTTTGGAAGAGTGTGAGCAGGAATGCTTGAGAAACTGCTCTTGCACTGCTTATGCAGCTGCTGATGTGAGGAACGGTGGAAGTGGATGCTTAGCATGGCATGGGAATTTAATGGACACGAAAAAACTAAGTGATCAAGGCCAAGATTTATTTGTACGAGTTGATGCAGTTGAACTAGCCAATCACTACAAAAAAAGTAAAAGAGTACCTGGTAAAAAGAATATGGTTGCAATTCTGGTAGCATCCATACTTGCAACAGTCCTTCTACTCTCCTGTGTGTATTACCTGTGGAAGATAAAAAGAAAGGATAAAATGATGCGGCATTTAGATCAAGATTCCACTGGAGAAGAGAACGATGTTCAAAGCAGCACACATCCAAATCTTCCCTTTTTCAGCTTTAAAATGATAATGGTGGCCACAAGAAATTTTGGTCATGAGAATAAACTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGCTGCCTAGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGATTCAGGTCAAGGGACAGAAGAGTTTAAAAATGAAGTTACACTACTGGTTAAACTCCAACACAGAAATCTCGTGAGGTTGCTCGGTTGTTGCTTTGAAAAGGAAGAAAGGATGCTAATCTATGAATACCTACCAAACAAAAGCTTGGACTTCTTTATATTCGATAAAAACCAAAGGTCATCATTGGATTGGGGTCAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCCGAAAATAATTCACAGAGATCTAAAAGCCAGCAACGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGAACGAGAAGAGTGGTTGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTTAGTTATGGGGTCTTGCTACTGGAGATTATTGCTGGCAAGAGGAACACAGATCGTGAAACGGGAAGAGATTCCCCAAATTTAATTGGATACGTGTGGATACTTTGGACAGAAGGAAGGGCCCTTGATATAGTTGATCCAACACTGGGTCAGTCTTATCCTCCTGCTATAGTTCTGAGGTGCATTCAAATTGGACTCTTGTGTGTTCAAGAAAATGCCATGAATAGACCATCCATGTTAGAAGTTGTTTTCATGCTTGGCAATGAAACACCTCTTTGCCAACCCCAAAAGCCAGCATTTTTATTCAATGGCAACCAAGAGTCATCATCAACATCGGGAGGAGGATCTTCAATAAATGAAATAACAGCAACCACCATTAGTGCTCGCTAA 2541 0.4085 MHSATNLLWLFMDQNNEHKLHTNWLLNTLMLLLLSFSVCSCSDTISTDKPLRDGELLVSKAKTFTLGFFSPGKSTSRYVGIWYNLPIQTVVWVANRDSPINDTSGVLSINPEGNLVLHHNFSTIPIWSTNVSATQSNSNTNVIAQLSDIANLVLILNNTKTVIWQSFDHPTDTLLPDIRLGFDRRTNQNWFIESWKTDDDPGAGAFTLKFSTRGKPQLFVYNHNLPWWRGGSWNGELLIGVPNMKRDTATFNVSFVEDDNHLALSYNMFDKSIIPRIVVQQSGFFQIFTWDNRKSQWNRYWSEPTDQCDNYGTCGSNSNCDPLNFEDFKCTCLPGFEPKFPRDWYENRDGSGGCVRKKGASVCGNGEGFVNIEGLKIPDTSVAIVKMGLSLEECEQECLRNCSCTAYAAADVRNGGSGCLAWHGNLMDTKKLSDQGQDLFVRVDAVELANHYKKSKRVPGKKNMVAILVASILATVLLLSCVYYLWKIKRKDKMMRHLDQDSTGEENDVQSSTHPNLPFFSFKMIMVATRNFGHENKLGQGGFGSVYKGCLVNGQEIAVKRLSKDSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLIYEYLPNKSLDFFIFDKNQRSSLDWGQRFEIICGIARGVLYLHQDSRPKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTRRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTDRETGRDSPNLIGYVWILWTEGRALDIVDPTLGQSYPPAIVLRCIQIGLLCVQENAMNRPSMLEVVFMLGNETPLCQPQKPAFLFNGNQESSSTSGGGSSINEITATTISAR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01950 846 CDD STKc_IRAK 538 803 - -
Rops2g01950 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 496 607 - -
Rops2g01950 846 SMART blect_4 48 170 IPR001480 -
Rops2g01950 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 201 IPR036426 -
Rops2g01950 846 SMART ntp_6 364 443 IPR003609 -
Rops2g01950 846 Pfam D-mannose binding lectin 89 196 IPR001480 -
Rops2g01950 846 CDD B_lectin 48 170 IPR001480 -
Rops2g01950 846 ProSiteProfiles Bulb-type lectin domain profile. 42 167 IPR001480 -
Rops2g01950 846 Pfam Protein tyrosine and serine/threonine kinase 535 799 IPR001245 GO:0004672|GO:0006468
Rops2g01950 846 ProSiteProfiles PAN/Apple domain profile. 363 444 IPR003609 -
Rops2g01950 846 MobiDBLite consensus disorder prediction 821 846 - -
Rops2g01950 846 ProSiteProfiles Protein kinase domain profile. 532 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01950 846 CDD PAN_AP_plant 364 443 - -
Rops2g01950 846 ProSiteProfiles EGF-like domain profile. 304 342 IPR000742 -
Rops2g01950 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 811 - -
Rops2g01950 846 Gene3D - 37 168 IPR036426 -
Rops2g01950 846 Pfam S-locus glycoprotein domain 228 340 IPR000858 GO:0048544
Rops2g01950 846 Gene3D Hepatocyte Growth Factor 361 441 - -
Rops2g01950 846 PIRSF SRK 15 846 IPR024171 GO:0004674
Rops2g01950 846 Pfam PAN-like domain 363 429 IPR003609 -
Rops2g01950 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 37 167 - -
Rops2g01950 846 CDD EGF_CA 306 339 - -
Rops2g01950 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 29 795 - -
Rops2g01950 846 SMART serkin_6 532 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01950 846 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Rops2g01950 846 Gene3D Phosphorylase Kinase; domain 1 492 607 - -
Rops2g01950 846 Gene3D Transferase(Phosphotransferase) domain 1 608 811 - -
Rops2g01950 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Rops2g01950 846 SUPERFAMILY Protein kinase-like (PK-like) 514 818 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01950 Rops-Chr2 30704903 30709395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01950 464 823 Receptor kinase-like Gene Family AT4G23190 53.022 2.30e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01950 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01950 - - tpra:123914661 1375.15