Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01949 ATGAAGTTATTTTTCCTGCTGTTTCTCCTTTACCGTTCATGCTACTCACTTGACAGCATAACCTTAAACCACCCAATGAAAGACGGCGACGTTTTGGTCTCCAACGACCGAGGAACCTTTGCACTTGGTTTCTTCAGTTTGGGAAATTCTAGAAGCCGATACGTTGGGATATGGTACAACAAAATTTCAGAACGAACGGTTGTGTGGGTTGCAAACAGAGACACTCCTCTGAACGACACTTCCGGTGTTCTCTCCATCAAAAACGGAAACCTCGTACTCCACAGTGAAAATAACCGAAACCTTAAACCCATTTGGTCTTCAAACGTTTCCATCTCATCTGCCAACGTTTCAGCTAAGCTTTTGGACACAGGAAACTTGGTTTTGATCCATAGTGGAACCAGCAACAACAAAACCAACAACAACGACAACGTTGTTCTGTGGCAGAGTTTTGATTATCCCGGTAACACTATGCTTCCATTCATGAAACTCGGGTTGGACCGAAAAACCGGTTTGAACCGTTTCCTAACATCATGGAAATCCCCAAACGACCCAGGATCCGGGAACTTGACTTACATAATCGACCCGACCGGGTTTCCACAGCTTTTCCTAAACAAGAATAAAGCTCCAATATGGCGGGTCGGGTCATGGACGGGTCAGAGATGGAGCGGGGTACCCGAAATGACTCCAAACTTCATCTTCAACGTGACCTTCATCGACAACGCAGATGAAGTTTCCATAGTGTATGAAGTGAAAGACCCTATGGTTCTCTCTAGAATGGTTCTGGAAGAAACGGGTCACGTGAGAAGGTTCACGTGGCAAGCTCACGAACACAGGTGGTTTCAAATCTGGTACGCTCCGAAAGAGGAGTGTGACAACTTCAGAGAGTGCGGGTCGAACTCGAATTGCGACCCGTATAACGCGGACAAGTTTGAGTGTGAGTGTTTGCCCGGGTTTGAACCCAAGTTCGAGCGAGAATGGTATCTAAGAGACGGGTCGGGTGGGTGCGTGAGGAAGAGAAACGTGTCCACGTGTCAAAGTGGGGAGGGGTTTGTGAAGGTGGCACGCGTGAAGGTGCCGGATACTTCAAAGGCACGTGTGGATGCGAGGTTGGGCTTGAGAGAGTGCAGGGAGCAGTGCTTGAGGGATTGCTCATGTGCAGCATTTACGAGTGAAAATGAGAGCTCACAAAGTGGGTGTGTTACTTGGCATGGAGACGTGGAGGATACAAGAACATACACACAAGTAGGACAGGATTTGTATGTACGTGTGGATGCACTTGAATTAGCTAAATATGCAAGACATCCATATGGCTCTCTCGGTAAGAAGGGGATGGTGGCAATTTTAGCCGTTGCTGCTTGCTTGTTATTGTTTCTGGGGATCGTTTTTGTGTATTGGTTTGTAAAAATCAGGAAACATGGGATGAGAAAGGATCGCAAGTATTCCTTTCGTCTTAGCTTTGAGGACTCTCCCGATCAACAAGAATTTGACAGTACGCAAAATTCAGATTTACCATTCTATGATCTTAGCTCCATAGCTGCTGCAACAGACAATTTCTCCACTGCTAACAAGCTTGGTCAAGGTGGTTTTGGTTCTGTTTATAAGGGTGTACTGAGTAATGGAAAGGTAATAGCAGTGAAGAGACTGTCAAAGCATTCAGGACAAGGCATAGCAGAGTTTAAAACTGAGGTTGTTTTGATTTCAAAGCTCCAACATAGAAATCTTGTTAGGATCTTAGGTTGCTGCACTCAAGGAGAGGAGAAGATGTTGATCTATGAGTATTTGCCTAACAAAAGCTTGGACTCTTTTATTTTTGATGAATCTAACAGATCACAGCTAGACTGGAGAAAACGATTTGATATCATCTGTGGAGTTGCTAGAGGGATCTTATACCTTCATCAAGATTCAAGATTAAGAATCATTCATAGAGACCTAAAGGCCAGTAATGTCTTGCTTGACTCTTCTATGAACCCAAAAATTGCAGATTTTGGCATGGCTAAAATATTTGGTGGGAATCAAATTGAAGCAAACACAAATCGTGTTGTTGGAACCTATGGCTATATGTCACCAGAATATGCCATGGAAGGACAATTTTCAATAAAGTCTGATGTATACAGCTTTGGAGTTTTACTTCTAGAGATTGTTACAGGCAGAAAGAACAGTGGTCTATATGAGGACATTACATCTACAAATTTAGTTGGACATATATGGGATCTATGGAGAGAAGGCAAAGCCTTGGAGATTGTTGATGAATCATTAGGAGAGTCATGCTCTGACCATGAAGTCCTAAGATGCATCCAAATTGGGCTTTTATGTGTACAAGATTATGCTGCAGACAGGCCATCTATGCCAGCAGTTGTTTCCATGTTGGGTAGTGACTCAACTCTTCCTACACCAAAACAGCCAGCATTTATTTTCAAGAGAACTAATTTTGAGAGTTCAAATCCATCAACCAGTGAAGGTATTTATTCAGTAAATGAGGTTAGTATGACTATGATTGAAGCTCGCTGA 2508 0.4342 MKLFFLLFLLYRSCYSLDSITLNHPMKDGDVLVSNDRGTFALGFFSLGNSRSRYVGIWYNKISERTVVWVANRDTPLNDTSGVLSIKNGNLVLHSENNRNLKPIWSSNVSISSANVSAKLLDTGNLVLIHSGTSNNKTNNNDNVVLWQSFDYPGNTMLPFMKLGLDRKTGLNRFLTSWKSPNDPGSGNLTYIIDPTGFPQLFLNKNKAPIWRVGSWTGQRWSGVPEMTPNFIFNVTFIDNADEVSIVYEVKDPMVLSRMVLEETGHVRRFTWQAHEHRWFQIWYAPKEECDNFRECGSNSNCDPYNADKFECECLPGFEPKFEREWYLRDGSGGCVRKRNVSTCQSGEGFVKVARVKVPDTSKARVDARLGLRECREQCLRDCSCAAFTSENESSQSGCVTWHGDVEDTRTYTQVGQDLYVRVDALELAKYARHPYGSLGKKGMVAILAVAACLLLFLGIVFVYWFVKIRKHGMRKDRKYSFRLSFEDSPDQQEFDSTQNSDLPFYDLSSIAAATDNFSTANKLGQGGFGSVYKGVLSNGKVIAVKRLSKHSGQGIAEFKTEVVLISKLQHRNLVRILGCCTQGEEKMLIYEYLPNKSLDSFIFDESNRSQLDWRKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSSMNPKIADFGMAKIFGGNQIEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIVTGRKNSGLYEDITSTNLVGHIWDLWREGKALEIVDESLGESCSDHEVLRCIQIGLLCVQDYAADRPSMPAVVSMLGSDSTLPTPKQPAFIFKRTNFESSNPSTSEGIYSVNEVSMTMIEAR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01949 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Rops2g01949 835 SMART serkin_6 518 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01949 835 ProSiteProfiles Protein kinase domain profile. 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01949 835 Gene3D Transferase(Phosphotransferase) domain 1 594 798 - -
Rops2g01949 835 ProSiteProfiles PAN/Apple domain profile. 344 424 IPR003609 -
Rops2g01949 835 CDD STKc_IRAK 524 789 - -
Rops2g01949 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 3 781 - -
Rops2g01949 835 CDD B_lectin 23 153 IPR001480 -
Rops2g01949 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 797 - -
Rops2g01949 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 13 150 - -
Rops2g01949 835 Pfam D-mannose binding lectin 66 179 IPR001480 -
Rops2g01949 835 Gene3D - 14 150 IPR036426 -
Rops2g01949 835 Pfam Domain of unknown function (DUF3403) 792 835 IPR021820 GO:0004674
Rops2g01949 835 Pfam PAN-like domain 344 408 IPR003609 -
Rops2g01949 835 SMART blect_4 23 153 IPR001480 -
Rops2g01949 835 CDD PAN_AP_plant 342 423 - -
Rops2g01949 835 SUPERFAMILY Protein kinase-like (PK-like) 502 811 IPR011009 -
Rops2g01949 835 SMART ntp_6 345 423 IPR003609 -
Rops2g01949 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 184 IPR036426 -
Rops2g01949 835 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Rops2g01949 835 Gene3D Phosphorylase Kinase; domain 1 482 593 - -
Rops2g01949 835 ProSiteProfiles Bulb-type lectin domain profile. 17 141 IPR001480 -
Rops2g01949 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Rops2g01949 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 484 593 - -
Rops2g01949 835 Pfam S-locus glycoprotein domain 211 322 IPR000858 GO:0048544
Rops2g01949 835 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01949 Rops-Chr2 30680644 30685010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01949 478 835 Receptor kinase-like Gene Family AT4G11530 56.438 2.55e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01949 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01949 - - gmx:100812814 1397.88