Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01946 ATGGACTCAATATTGGGTAGTTTTTCACTATCATTACAGGCCTGCAAAATTGTTGACGGGCAACGCTATACAAGAAGACTGAATGAGAAGCAAATTACTGCTCTATTGAAAGTTACTTGCCAGAGACCTCATGATCTGGAAAATGACATTTTAAAGATTCTATTTAAGAGAAGTGCACTGCAACACTATCAAATACCATGTCTCTTACAGGATAAAGATTGCTTACTTTGGTACAAATTCTGTGTCAAGCCAGGAGATCGCAAAAATGGTTCCTGGGCCTCCTCCGAGGCAACAACCTCCTGTCCAGGATCCATATTAATTCCAAGTTTACAGCCTGATGTATTGCCCCCTGGAATTCTAAATTTATCATTATCTTCTAATATTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAGAGTTTTTGAACATGCCTATGGAAAGCACTTGCTTATGTTACATGCTAAAAATATTGTACACAGAGATCTTTTCTTGCAAAGGGACATTGAAGGAGAAAATATACTTGTAGATACTAATGGGCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACTGGGCAATCATGTCCATTATCATTCATGGGAAGCCCTTATTGGATGGCTCTAAAGGACATAAAGAACTCTAGTGGCTCCAACCTTGCTCTTCATATATGGAGTCTTGGATGCACAATTTTGGAAATGGCTGCAACTAAGCTTCCGTGGAGTCAGTGTGAAGGGCTAGGAAACTCAACTAATTAA 777 0.3964 MDSILGSFSLSLQACKIVDGQRYTRRLNEKQITALLKVTCQRPHDLENDILKILFKRSALQHYQIPCLLQDKDCLLWYKFCVKPGDRKNGSWASSEATTSCPGSILIPSLQPDVLPPGILNLSLSSNIYNLGTGKGTSVLEMVRVFEHAYGKHLLMLHAKNIVHRDLFLQRDIEGENILVDTNGRVKLADFGMAKHITGQSCPLSFMGSPYWMALKDIKNSSGSNLALHIWSLGCTILEMAATKLPWSQCEGLGNSTN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01946 258 SUPERFAMILY Protein kinase-like (PK-like) 154 250 IPR011009 -
Rops2g01946 258 Pfam Protein kinase domain 156 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01946 258 SUPERFAMILY PAZ domain 12 53 IPR036085 GO:0005515
Rops2g01946 258 Gene3D Transferase(Phosphotransferase) domain 1 131 256 - -
Rops2g01946 258 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 154 251 - -
Rops2g01946 258 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01946 Rops-Chr2 30637817 30644009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01946 127 253 MAP Kinase Kinase Kinase AT1G63700 60.630 1.08e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops2g01946 Pkinase 9e-20 CL0016