Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01940 ATGGGTAGGAAGAACTATGATGATGACACAAAAGTGTTCAAATCCAAGAACCTTGTGACTGAAAGGAAGAGAAGGGAGAAGCTCAGTAGCAGGCTTTTGATGCTGCGGTCTTTAATGAACAAAGCAACCATTGTTGATGATGCTATCACTTACATCAAGAAGCTACAAGATGAAGTCCAGAGTCTCAGCCAAGAGCTTCATGAAATGGAAGCAACCTCAGAGGAAATAGCAGAGCCAAAAATAGATGAATTTGATGCTGCAGAAGAGATGAAGAAATGGGGGGTACAGGAAGAGGTCCGGGTGACAAAGATTGATGGGAATAAATTGTGGATCAAGATGATCATTGAAAAGAAGAGGGGAAGGTTCAAGAAATTGATGGAGGCCATGAAAACTTTTGGCATTGAAATGACAGACATCAATGTTACAACCATAAAAGGAGCATTTCTAATTACAACCTGCATACAGGGCGTGGATGGTGAAACACTTGAACTTTATCAAACCAAACAGTTGTTGCCAGATATTATCAAAGTCATTTAG 537 0.4022 MGRKNYDDDTKVFKSKNLVTERKRREKLSSRLLMLRSLMNKATIVDDAITYIKKLQDEVQSLSQELHEMEATSEEIAEPKIDEFDAAEEMKKWGVQEEVRVTKIDGNKLWIKMIIEKKRGRFKKLMEAMKTFGIEMTDINVTTIKGAFLITTCIQGVDGETLELYQTKQLLPDIIKVI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01940 178 Coils Coil 45 72 - -
Rops2g01940 178 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 11 168 - -
Rops2g01940 178 Gene3D - 13 78 IPR036638 GO:0046983
Rops2g01940 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 72 IPR036638 GO:0046983
Rops2g01940 178 SMART finulus 18 61 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01940 Rops-Chr2 30510119 30510999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01940 13 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 44.382 8.30e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01940 - - lja:Lj2g3v1278950.2 233.417