Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01926 ATGGTTGGAGTAGTTTTGTCATTTTCAATTTCATTCTGCTTAAGATGTCGAAGGAAGTGTAAAAAGGTGGAGAAGAGCAGTTCTCAGAGAGCATTGACCATTCCAATTCATGCCAAAGGGGTTGAATCCAGCACAACATTATCAGACTCCAATATGGGTCTAGAGTCACCCAGAACATCTGAGTGGAGTAACATGCCTTTATGGTTGGAAGGACTTAGAAGGAAGAATGTAGTTTCAGCATGTGGAATTCCCAAGTATTTTTACAAAGAAATACAGAAGGCTACTTCTAATTTCACAACCATCATAGGCCATGGAGCATTTGGTCCTGTTTACAAAGCACAGATGTCTACAGGTGAGACAGTTGCAGTTAAAGTTCTTGGTATGAATTCAAGGCAAGGAGAAGACGAATTTTTAACTGAGGTCCTATTACTTTCAAGATTGCATCACAGAAACCTTGTGGGTTTGGTGGGGTATGCTGCAGATAGAGGACAGCATATGCTCCTTTACATTTACATGAGCAATGGCAGTCTTGCTTCTCATTTGTATGGCAAAAATCATGAGCCATTGAGCTGGGATTTGAGACTTAGCATAGCACTAGACGTTGCGAGGGGACTAGAATATCTACATTATGGGGCTGCTCCACCTGTTGTGCACCGTGACATCAAGTCTTCCAACATACTGTTGGACCAGTTTATGAGAGCTAAGGTCACTGACTTTGGGCTATCCAGACCAGAGATGATCAAACCTCGTATGTCAAATGTCAGAGGAACTTTTGGATATCTTGATCCTGAGTATATGACTACAAGAACCTTCACTAAGAAAAGTGACGTATATGGTTTTGGTGTGCTACTGTTTGAGCTTATAACTGGCAGGAATCCACAGCAGGGGCTCATGGACTATGTAGAACTAGCAGCGATGGAAGGAGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATTCGCAACTGAATGGTAAATATGATGTGCATAAGCTTAATGACATGGCTTCACTAGCATTCAAATGTGTCAATGGAGTCTCCAAAATCCGACCTTCAATGAGGGATATTGTTCAAGCATTATCTCAGCTTTGTAAGCAGCATAGTAGAAATGATAGCCGAACATCTCCTGCTGCATTAAAGGAAGTGTCCATTGAAGTGGACCAGCTAGAAACTCATGACTTTTCATCAATTGAGTGTTCAAAGGAGCTGCGCAAATTGCATAGCCGATAA 1227 0.4189 MVGVVLSFSISFCLRCRRKCKKVEKSSSQRALTIPIHAKGVESSTTLSDSNMGLESPRTSEWSNMPLWLEGLRRKNVVSACGIPKYFYKEIQKATSNFTTIIGHGAFGPVYKAQMSTGETVAVKVLGMNSRQGEDEFLTEVLLLSRLHHRNLVGLVGYAADRGQHMLLYIYMSNGSLASHLYGKNHEPLSWDLRLSIALDVARGLEYLHYGAAPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMIKPRMSNVRGTFGYLDPEYMTTRTFTKKSDVYGFGVLLFELITGRNPQQGLMDYVELAAMEGEGKVGWEEIVDSQLNGKYDVHKLNDMASLAFKCVNGVSKIRPSMRDIVQALSQLCKQHSRNDSRTSPAALKEVSIEVDQLETHDFSSIECSKELRKLHSR* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01926 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Rops2g01926 408 FunFam calcium/calmodulin-regulated receptor-like kinase 1 172 379 - -
Rops2g01926 408 SUPERFAMILY Protein kinase-like (PK-like) 78 359 IPR011009 -
Rops2g01926 408 ProSiteProfiles Protein kinase domain profile. 96 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01926 408 Gene3D Transferase(Phosphotransferase) domain 1 172 385 - -
Rops2g01926 408 CDD STKc_IRAK 102 362 - -
Rops2g01926 408 Pfam Protein tyrosine and serine/threonine kinase 98 359 IPR001245 GO:0004672|GO:0006468
Rops2g01926 408 SMART serkin_6 96 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01926 408 PANTHER OS01G0750732 PROTEIN 2 374 - -
Rops2g01926 408 Gene3D Phosphorylase Kinase; domain 1 61 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01926 Rops-Chr2 30230849 30236147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01926 82 363 Receptor kinase-like Gene Family AT3G19300 43.206 6.87e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Rops2g01926 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01926 - - gmx:100816549 623.239