Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01919 ATGGCTTCCCGTAACCAAAACAGACCTCCTCGTAGCCCCTCCAACAGAAAGGTTGTTGGTGCCGAAGAACTCGCCACAGACAAGCGTCGAAGGGTTGGAGCTGAAAGGATGGAGCGACAGGGAGTGACAGGGAGAAACAGAGCGCCGTTAACGGCGGTGAACAATGCTAGCGCGGCAAGTGACTGTGACGTAATGGAATGTAACACCGTTGAGTACACAATGGAGTATGTAGAAGAAGTGCTTAATGAGAAGATGAAAAAGGGGAATCCCTATGATAATAAGAAAAAAATGGAGCAGTTGTTGGATTATATTAAGCGGCTTAAGCCTTGCCTTCGATGGTTAATAAAAGTTGTAGAAGGCAATGTTCAAGAAAATGAAAAGCTTCAGTCTGAATTAGAGTCTGCTCTGAAGAAGTGCAGTGATACTGAGACTGAGATGGAAAATAAAATTGAGAAGTTGAACGAGATTATATCTGAGCTGAGGAAAGAAATATCTTCCTTACAAGAGAGAACTGTGAAGGAAGAATCAGATAAGTTGGAAGCAATTAACTGTTATAGAGAAGAAAAGGAAGCTAGAAGTGCAGTTGAGAAAGTTAGGGATGAGAAATCAGCTGAGCTTGAAAAAGTTAGGGATGAGAAATCAGCTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAAGCGATCACAGGAGTATAATATGAGCCTGCAGCAGTACAATAGTCGTCTCCAGTCAGAACTCGAAACAGCTAATGAGGCACATAAACGACTTGAAACAGAGAAAGCAACCATCGTTGAGAGCCTTAGCAATGTAAGAGGTCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCATTGGATGAGGCTATAAAGCAGAAAGAAATGTTTGCAAATGAACTCAAATGCCTTCGTGAAGAATTAAAACAAATTAGAGATGACCGTGATCGCCATAAGGAACAAGTAAATGCCTTAATTGGAGAAGTAGCAAAATACAACGAATGTACAGAGAAATCAGTTGCACAATTGGATAATTTAACAACTAAAACAAATGCTCTTGAGAAAACTTGTTCTTCGCAAAAGAAGGAAATAGATATACTGCAGCAGCAGTTGATTGCAGAAAAGGAGAAGTCAAAGATGTCTGTTTTATCAGCTTCAGAAACAAGAACAATGTTTGAAGATCAGAAAAGAATTATACATGAACTACGGAATCGATTGGCAGAAAAAGAATTACAAGTAGTTGAAGGAGAGAAGCTAAGAAAAAAACTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTGCGACCGTTACTACCAGAGGATGGTACGGGAACAGACATGGTTGTTTCTTACCCTATGTCAACAGAAATGCAAGGCCGGGGCATTGAATTGATACAAAATGCAGGGCAGAAGTATCCTTTTACATTTGACAAGGTATTTAATCATGAGGCTTCTCAGCAGGATGCTTTCATAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGATACAAGGTATGCATCTTTGCTTATGGGCAGACGGGTTCAGGCAAAACTTATACAATGATGGGTAGGCCTGACGCTCCAGATCTGAAAGGGTTGATACCACGTTCTTTAGAACAAATATTCCAGACTAGTCAGTCCCTGAAAGACCAGGGGTGGAAGTACAAAATGCAGGCATCAATACTGGAAATATATAATGAAACCATCAGAGATTTGTTATCATCAAATCGGTCAAGTGGGATTGACCAGACACGAACAGAAAGTAGTGCTCCCAGCAAGCAGTACACTATTAAACATGATGCAAATGGAAACACACAAGTCTCGGACCTCACCATTGTGGATGTTTGTAGCGTGAATGAGATTTCCTCCCTCCTGAAACAGGCTGCGCAAAGCCGGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCAAGAAGCCACTTTGTATTTACTTTACGTATATGTGGTATTAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTTGTTGATCTGGCTGGCAGTGAAAGACTGTCAAGGAGTGGAGCAACTGGGGACCGCTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATATTTGCATTGGCAAAGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAACTGACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCAAAAACGTTGATGTTTGTCAACATCTCACCTGATCAATCTTCAATTGGTGAGTCACTTTGCTCACTTCGTTTTGCGGCCAGAGTCAATGCCTGTGAAATTGGGGTTCCACGGCGTCAGACTCAGACATCCACACGGCCCTTAGATTCTCGGTTGAGCTATGGTTAA 2403 0.4182 MASRNQNRPPRSPSNRKVVGAEELATDKRRRVGAERMERQGVTGRNRAPLTAVNNASAASDCDVMECNTVEYTMEYVEEVLNEKMKKGNPYDNKKKMEQLLDYIKRLKPCLRWLIKVVEGNVQENEKLQSELESALKKCSDTETEMENKIEKLNEIISELRKEISSLQERTVKEESDKLEAINCYREEKEARSAVEKVRDEKSAELEKVRDEKSAAEQKAISNEDLYKRSQEYNMSLQQYNSRLQSELETANEAHKRLETEKATIVESLSNVRGHNKALQDQLVSLKVSLDEAIKQKEMFANELKCLREELKQIRDDRDRHKEQVNALIGEVAKYNECTEKSVAQLDNLTTKTNALEKTCSSQKKEIDILQQQLIAEKEKSKMSVLSASETRTMFEDQKRIIHELRNRLAEKELQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGTGTDMVVSYPMSTEMQGRGIELIQNAGQKYPFTFDKVFNHEASQQDAFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSSNRSSGIDQTRTESSAPSKQYTIKHDANGNTQVSDLTIVDVCSVNEISSLLKQAAQSRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLVDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSIGESLCSLRFAARVNACEIGVPRRQTQTSTRPLDSRLSYG* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01919 800 Gene3D Kinesin motor domain 381 779 IPR036961 -
Rops2g01919 800 Pfam Kinesin motor domain 442 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 FunFam Kinesin-like protein 382 779 - -
Rops2g01919 800 CDD KISc_C_terminal 434 779 - -
Rops2g01919 800 Coils Coil 346 380 - -
Rops2g01919 800 Coils Coil 276 331 - -
Rops2g01919 800 PRINTS Kinesin heavy chain signature 678 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 PRINTS Kinesin heavy chain signature 512 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 PRINTS Kinesin heavy chain signature 647 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 PRINTS Kinesin heavy chain signature 727 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 SMART kinesin_4 434 785 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 PANTHER KINESIN-LIKE PROTEIN KLP-3 146 791 IPR027640 GO:0003777|GO:0007018
Rops2g01919 800 MobiDBLite consensus disorder prediction 21 39 - -
Rops2g01919 800 Coils Coil 234 261 - -
Rops2g01919 800 MobiDBLite consensus disorder prediction 1 39 - -
Rops2g01919 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 775 IPR027417 -
Rops2g01919 800 ProSitePatterns Kinesin motor domain signature. 677 688 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops2g01919 800 ProSiteProfiles Kinesin motor domain profile. 436 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops2g01919 800 Coils Coil 118 177 - -
Rops2g01919 800 Coils Coil 192 219 - -
Rops2g01919 800 Coils Coil 395 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01919 Rops-Chr2 30158811 30164739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01919 345 774 Calmodulin-binding Proteins AT5G65930 37.986 9.58e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01919 K10405 - gmx:100818473 1168.68