Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01915 ATGTGCCCGGTAATGGCTTTTCAAATAAAAAGGGATATTCTCTTCCAGACCTTCTGGTGTTCCTTGCTCAGTATCTTGATGACAAGTCAATGTACTGAAACTGATATCCACTGTTTAAAATCCATTAAGGATTCCTTGGAAGACCCTAATAATTACTTATCCTCAAGCTGGAACTTTTACAACAAAACCGAAGGTTTCATATGTGAATTTGTTGGTGTTGATTGCTGGCATCCTGATGAGAATAGAGTACTAAATCTCAAACTATCTAACATGGGGCTGAAGGGCCAGTTTCCACGGGGCCTTCAGAATTGCTCGTCATTGACAGGCTTAGACCTTTCACTCAACGAGCTCTCAGGACCCATCCCATCTGATATAAGTTCATTACTCATGTTTGTTACCGCCGTTGATCTCTCAGATAACAAATTCACTGGTGAAATTCCGAAAACTTTGGCAAATTGCACTTACCTGAATAGTCTTAAACTTGATAACAACATGTTGAGTGGTCAAATCCCAAAAGAATTTGGGCAACTTCAAAGGATTAAAACAATTTCCTTTGCTAACAATCATTTGTCAGGGCCAGTGCCTGTGTTCAGCAAAGGGGTACTTTGTAATTATGCTAATAATAGTGGACTATGTGGAGAACCTTTGGCACCCTGCTCCGTTGCCGTTGACGAATTCCATCAATCATTCAAGGATGGCCTTATTGTTAGTTTTGCTTTCTCAGTAACGACTTGTGCTATTGTTGCTTTTATGTCGTACTCCGGCAGTGCACCTTGCGCTCAATTGAATCAGGATAAAAACCACAAAGCCAAAGAACTGAGCAAATGTATTTGTTCCATAACAAGGAGGTTGACGCGAAGGGTGGCTAATCAGATGCACGAATTGCTACCTCTGCTGCTTGTAGAGAAAGGAAGCAAAGAGATCTCTGAACTATTAGAAAGATTTACTTCGACGATTTGGTTTGAAGAACTCCGTGACGCAACTGCCTGTTTTTCTATGGACAATGCCATTGGAGTTGGGAAGATGGGAATAATGTACCGGGGAAGGCTACCTAATGGTCAGTTCCTAGCTGTTAAGAGACTATTGGACTCTCAACTGTTTAAAAGGCAGCTCCTTTCTGAAATAATGATTCTGGGTAAGTACAGACACAGAAATATAGTTCCCCTGCTTGGGTTCTGCATTGAAAGAAATGAATGGATTTTGGCATACCCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTTGTGAGATTGAAATGGCCTGAGAGGTTCAACATTGCACTTGGGATTGCAAGAGGGTTATCATGGCTCCTTCATAACTGCAATTTGCATATAGTGCATCTTAATATATGTTCAGAATGTATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGATTCCCAACACTGAGGATGATTTAGGTAAGATATTTAAAGTAGATGATGGGAAGAAGGATGTCTATGACTTTGGAAGTGTACTTTTTGAACTGATTACAGGAAAAACATATGAGGAACTGTCCCGTTCATCCAGCACTACTGACCTCTGTTGTAACCCTTCAAATTTTTATAATGCAATTGATAAATCTCTGATCGGGGAAGGATTTGAAAATGAAGTATGCACTCTCATCAAAATTGCTTGTGAGTGTGTTCAGCCTTTACCACCAGATCAAAGGCCAACAATGCTTCAAGTTTACAACAATGTGAGAAATATAAGGAAAGGACGACACGGATTCAGGGATGATTCTGACACGCCAGGGGGATCAGAAATTGCTTCTGTTATTAGTATAGATGAAATCGTCGAGTTGTAA 1854 0.4008 MCPVMAFQIKRDILFQTFWCSLLSILMTSQCTETDIHCLKSIKDSLEDPNNYLSSSWNFYNKTEGFICEFVGVDCWHPDENRVLNLKLSNMGLKGQFPRGLQNCSSLTGLDLSLNELSGPIPSDISSLLMFVTAVDLSDNKFTGEIPKTLANCTYLNSLKLDNNMLSGQIPKEFGQLQRIKTISFANNHLSGPVPVFSKGVLCNYANNSGLCGEPLAPCSVAVDEFHQSFKDGLIVSFAFSVTTCAIVAFMSYSGSAPCAQLNQDKNHKAKELSKCICSITRRLTRRVANQMHELLPLLLVEKGSKEISELLERFTSTIWFEELRDATACFSMDNAIGVGKMGIMYRGRLPNGQFLAVKRLLDSQLFKRQLLSEIMILGKYRHRNIVPLLGFCIERNEWILAYPYMSNGRLSKWLHPLESEVVRLKWPERFNIALGIARGLSWLLHNCNLHIVHLNICSECILLDENFEPKISNFGEAKFMIPNTEDDLGKIFKVDDGKKDVYDFGSVLFELITGKTYEELSRSSSTTDLCCNPSNFYNAIDKSLIGEGFENEVCTLIKIACECVQPLPPDQRPTMLQVYNNVRNIRKGRHGFRDDSDTPGGSEIASVISIDEIVEL* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01915 617 ProSiteProfiles Protein kinase domain profile. 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01915 617 SUPERFAMILY Protein kinase-like (PK-like) 312 581 IPR011009 -
Rops2g01915 617 Gene3D Ribonuclease Inhibitor 32 220 IPR032675 -
Rops2g01915 617 Gene3D Phosphorylase Kinase; domain 1 299 405 - -
Rops2g01915 617 Gene3D Transferase(Phosphotransferase) domain 1 406 599 - -
Rops2g01915 617 Pfam Protein tyrosine and serine/threonine kinase 333 581 IPR001245 GO:0004672|GO:0006468
Rops2g01915 617 FunFam Nuclear pore complex protein NUP107 32 196 - -
Rops2g01915 617 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 38 196 - -
Rops2g01915 617 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Rops2g01915 617 SUPERFAMILY L domain-like 29 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01915 Rops-Chr2 30093518 30096186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01915 15 600 Receptor kinase-like Gene Family AT3G28450 36.170 1.99e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops2g01915 PK_Tyr_Ser-Thr 6.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01915 - - psat:127106772 787.334