Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g01915 | ATGTGCCCGGTAATGGCTTTTCAAATAAAAAGGGATATTCTCTTCCAGACCTTCTGGTGTTCCTTGCTCAGTATCTTGATGACAAGTCAATGTACTGAAACTGATATCCACTGTTTAAAATCCATTAAGGATTCCTTGGAAGACCCTAATAATTACTTATCCTCAAGCTGGAACTTTTACAACAAAACCGAAGGTTTCATATGTGAATTTGTTGGTGTTGATTGCTGGCATCCTGATGAGAATAGAGTACTAAATCTCAAACTATCTAACATGGGGCTGAAGGGCCAGTTTCCACGGGGCCTTCAGAATTGCTCGTCATTGACAGGCTTAGACCTTTCACTCAACGAGCTCTCAGGACCCATCCCATCTGATATAAGTTCATTACTCATGTTTGTTACCGCCGTTGATCTCTCAGATAACAAATTCACTGGTGAAATTCCGAAAACTTTGGCAAATTGCACTTACCTGAATAGTCTTAAACTTGATAACAACATGTTGAGTGGTCAAATCCCAAAAGAATTTGGGCAACTTCAAAGGATTAAAACAATTTCCTTTGCTAACAATCATTTGTCAGGGCCAGTGCCTGTGTTCAGCAAAGGGGTACTTTGTAATTATGCTAATAATAGTGGACTATGTGGAGAACCTTTGGCACCCTGCTCCGTTGCCGTTGACGAATTCCATCAATCATTCAAGGATGGCCTTATTGTTAGTTTTGCTTTCTCAGTAACGACTTGTGCTATTGTTGCTTTTATGTCGTACTCCGGCAGTGCACCTTGCGCTCAATTGAATCAGGATAAAAACCACAAAGCCAAAGAACTGAGCAAATGTATTTGTTCCATAACAAGGAGGTTGACGCGAAGGGTGGCTAATCAGATGCACGAATTGCTACCTCTGCTGCTTGTAGAGAAAGGAAGCAAAGAGATCTCTGAACTATTAGAAAGATTTACTTCGACGATTTGGTTTGAAGAACTCCGTGACGCAACTGCCTGTTTTTCTATGGACAATGCCATTGGAGTTGGGAAGATGGGAATAATGTACCGGGGAAGGCTACCTAATGGTCAGTTCCTAGCTGTTAAGAGACTATTGGACTCTCAACTGTTTAAAAGGCAGCTCCTTTCTGAAATAATGATTCTGGGTAAGTACAGACACAGAAATATAGTTCCCCTGCTTGGGTTCTGCATTGAAAGAAATGAATGGATTTTGGCATACCCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTTGTGAGATTGAAATGGCCTGAGAGGTTCAACATTGCACTTGGGATTGCAAGAGGGTTATCATGGCTCCTTCATAACTGCAATTTGCATATAGTGCATCTTAATATATGTTCAGAATGTATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGATTCCCAACACTGAGGATGATTTAGGTAAGATATTTAAAGTAGATGATGGGAAGAAGGATGTCTATGACTTTGGAAGTGTACTTTTTGAACTGATTACAGGAAAAACATATGAGGAACTGTCCCGTTCATCCAGCACTACTGACCTCTGTTGTAACCCTTCAAATTTTTATAATGCAATTGATAAATCTCTGATCGGGGAAGGATTTGAAAATGAAGTATGCACTCTCATCAAAATTGCTTGTGAGTGTGTTCAGCCTTTACCACCAGATCAAAGGCCAACAATGCTTCAAGTTTACAACAATGTGAGAAATATAAGGAAAGGACGACACGGATTCAGGGATGATTCTGACACGCCAGGGGGATCAGAAATTGCTTCTGTTATTAGTATAGATGAAATCGTCGAGTTGTAA | 1854 | 0.4008 | MCPVMAFQIKRDILFQTFWCSLLSILMTSQCTETDIHCLKSIKDSLEDPNNYLSSSWNFYNKTEGFICEFVGVDCWHPDENRVLNLKLSNMGLKGQFPRGLQNCSSLTGLDLSLNELSGPIPSDISSLLMFVTAVDLSDNKFTGEIPKTLANCTYLNSLKLDNNMLSGQIPKEFGQLQRIKTISFANNHLSGPVPVFSKGVLCNYANNSGLCGEPLAPCSVAVDEFHQSFKDGLIVSFAFSVTTCAIVAFMSYSGSAPCAQLNQDKNHKAKELSKCICSITRRLTRRVANQMHELLPLLLVEKGSKEISELLERFTSTIWFEELRDATACFSMDNAIGVGKMGIMYRGRLPNGQFLAVKRLLDSQLFKRQLLSEIMILGKYRHRNIVPLLGFCIERNEWILAYPYMSNGRLSKWLHPLESEVVRLKWPERFNIALGIARGLSWLLHNCNLHIVHLNICSECILLDENFEPKISNFGEAKFMIPNTEDDLGKIFKVDDGKKDVYDFGSVLFELITGKTYEELSRSSSTTDLCCNPSNFYNAIDKSLIGEGFENEVCTLIKIACECVQPLPPDQRPTMLQVYNNVRNIRKGRHGFRDDSDTPGGSEIASVISIDEIVEL* | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g01915 | 617 | ProSiteProfiles | Protein kinase domain profile. | 331 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops2g01915 | 617 | SUPERFAMILY | Protein kinase-like (PK-like) | 312 | 581 | IPR011009 | - | |
Rops2g01915 | 617 | Gene3D | Ribonuclease Inhibitor | 32 | 220 | IPR032675 | - | |
Rops2g01915 | 617 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 405 | - | - | |
Rops2g01915 | 617 | Gene3D | Transferase(Phosphotransferase) domain 1 | 406 | 599 | - | - | |
Rops2g01915 | 617 | Pfam | Protein tyrosine and serine/threonine kinase | 333 | 581 | IPR001245 | GO:0004672|GO:0006468 | |
Rops2g01915 | 617 | FunFam | Nuclear pore complex protein NUP107 | 32 | 196 | - | - | |
Rops2g01915 | 617 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 38 | 196 | - | - | |
Rops2g01915 | 617 | Pfam | Leucine rich repeat N-terminal domain | 34 | 76 | IPR013210 | - | |
Rops2g01915 | 617 | SUPERFAMILY | L domain-like | 29 | 200 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g01915 | Rops-Chr2 | 30093518 | 30096186 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g01915 | 15 | 600 | Receptor kinase-like Gene Family | AT3G28450 | 36.170 | 1.99e-108 | 337 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Rops2g01915 | PK_Tyr_Ser-Thr | 6.1e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g01915 | - | - | psat:127106772 | 787.334 |