LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g01884	ATGGAGAACTATCAATACCCATCATACCCAGATTCCGGCGACTCCTCGCCGAGATCGAGGGAGATCGATTTCGAGAATCCGACGCCATGGGACGAGCAACAACAACCTCAGAACTACAAGACCAAGTTCCTTTGCAGCTACGGCGGGAAGATCCAACCACGCAGCCACGACAACCAACTCTCCTACGTCGGCGGCGACACCAAGATATTAGCCGTCGACCGGAATATCAAGTTTCCAACGTTCCTCTCGAAGCTCGCAGCCCTCTGCGACGCCACTCCTCAAGAATTAACCTTTAAGTACCAACTTCCCGGCGAGGACCTCGACGCGCTTATCTCAGTCACAAACGACGATGATCTTGAACACATGATGCATGAGTATGATAGACTCTTTCGTCCTTCTACTAAACCAGTTCGTATGAGGCTATTTCTTTTCACTGGTGTTTCAAATCCGGGTCCTATTCCAACCCAACCCGACCCGCTTAAACCACCATCAAACGTTGACTTTCTCTTCGGTCTTGACAAGCAAGTCGCTCCTCCTCCGTCTCACCCCACTGGGGTTAAGTTCCATGATACAATCCCGGAACCTGTTGCGCCGCCGACGGAGTATCAAACTCGTGGACCCGTTGTTGATCGGGTTATCGGGTCGGATCCGAATGAGATTCAGAGGCAGATGCAGCGTTTGCAGATTTCTGAGAATGATCAGAATTTGTATCGGAGGAGAAGTGAAGATGGGTTCTCCGGAGGGTACTCTGCGGCTGCCGGCGGAGAATATTACTTGCAGAAAGTGCCGGAGAAGGTCCCGCCGTCTAATTCGCAGGCTGGAGTTCAGGGTCACTGGCAGGAGAGGCAGTTTTCCGGGGAGAGTTTTCAGGGGGCGGTGACGGCTGCTACCGGAGGAGGGGACCAGCCGGTTTATATGATTCAGGCGCCGGGGACGTTCTATCACGCGCCGCCGGGTATGCGTCCGGCGACTCATGGGTACTACGCTGTGCAGCGAATGGGTTCTGAGGGTTACCGGGAACAGCCGGTGTATGGGGGTGTCCCACCTCCGAAAGCGGTGTTTTCGTCGGCGGGATCGGCGAGCTTGCAACCGCCCCAGCCGGTTAAGCCTTCGGGGTATGCGGAAGGATACGGCGTCGTTCGGTCAGCTGGGGTGCCGGATAATACGGGCGGTACTGCGTACGCGCAGGTGGCGTATGATAGTGCAAGTGGGAGACAGGTTTACTATACTGCGCCGCCAGGGGTTGTCCACGCGCCGCCGTACCAAGGTGTTTCTCCGATGATCGGTGCTGACGTAAGACAGGCCGGGGTTTCGATGGGCCAGGATGTTAAAGCGGTAAACAAGGTTTCCCAAGGATCTGTGTGA	1365	0.5538	MENYQYPSYPDSGDSSPRSREIDFENPTPWDEQQQPQNYKTKFLCSYGGKIQPRSHDNQLSYVGGDTKILAVDRNIKFPTFLSKLAALCDATPQELTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLFRPSTKPVRMRLFLFTGVSNPGPIPTQPDPLKPPSNVDFLFGLDKQVAPPPSHPTGVKFHDTIPEPVAPPTEYQTRGPVVDRVIGSDPNEIQRQMQRLQISENDQNLYRRRSEDGFSGGYSAAAGGEYYLQKVPEKVPPSNSQAGVQGHWQERQFSGESFQGAVTAATGGGDQPVYMIQAPGTFYHAPPGMRPATHGYYAVQRMGSEGYREQPVYGGVPPPKAVFSSAGSASLQPPQPVKPSGYAEGYGVVRSAGVPDNTGGTAYAQVAYDSASGRQVYYTAPPGVVHAPPYQGVSPMIGADVRQAGVSMGQDVKAVNKVSQGSV*	455

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Rops2g01884	454	MobiDBLite	consensus disorder prediction	1	15	-	-
Rops2g01884	454	Pfam	PB1 domain	56	144	IPR000270	GO:0005515
Rops2g01884	454	Gene3D	-	61	145	-	-
Rops2g01884	454	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	60	146	-	-
Rops2g01884	454	PANTHER	OS05G0427100 PROTEIN-RELATED	9	386	-	-
Rops2g01884	454	CDD	PB1_UP2	44	144	-	-
Rops2g01884	454	SUPERFAMILY	CAD & PB1 domains	56	146	-	-
Rops2g01884	454	MobiDBLite	consensus disorder prediction	1	35	-	-
Rops2g01884	454	SMART	PB1_new	55	146	IPR000270	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g01884	Rops-Chr2	29623015	29624537	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g01884	39	145	MAP Kinase Kinase Kinase	AT5G57610	47.664	3.04e-25	107

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g01884	-		-	adu:107480527	616.69

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops2g01884	2	29623015	29624537	Rops11g00351	11	4845402	4847050	PCT

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