Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01884 ATGGAGAACTATCAATACCCATCATACCCAGATTCCGGCGACTCCTCGCCGAGATCGAGGGAGATCGATTTCGAGAATCCGACGCCATGGGACGAGCAACAACAACCTCAGAACTACAAGACCAAGTTCCTTTGCAGCTACGGCGGGAAGATCCAACCACGCAGCCACGACAACCAACTCTCCTACGTCGGCGGCGACACCAAGATATTAGCCGTCGACCGGAATATCAAGTTTCCAACGTTCCTCTCGAAGCTCGCAGCCCTCTGCGACGCCACTCCTCAAGAATTAACCTTTAAGTACCAACTTCCCGGCGAGGACCTCGACGCGCTTATCTCAGTCACAAACGACGATGATCTTGAACACATGATGCATGAGTATGATAGACTCTTTCGTCCTTCTACTAAACCAGTTCGTATGAGGCTATTTCTTTTCACTGGTGTTTCAAATCCGGGTCCTATTCCAACCCAACCCGACCCGCTTAAACCACCATCAAACGTTGACTTTCTCTTCGGTCTTGACAAGCAAGTCGCTCCTCCTCCGTCTCACCCCACTGGGGTTAAGTTCCATGATACAATCCCGGAACCTGTTGCGCCGCCGACGGAGTATCAAACTCGTGGACCCGTTGTTGATCGGGTTATCGGGTCGGATCCGAATGAGATTCAGAGGCAGATGCAGCGTTTGCAGATTTCTGAGAATGATCAGAATTTGTATCGGAGGAGAAGTGAAGATGGGTTCTCCGGAGGGTACTCTGCGGCTGCCGGCGGAGAATATTACTTGCAGAAAGTGCCGGAGAAGGTCCCGCCGTCTAATTCGCAGGCTGGAGTTCAGGGTCACTGGCAGGAGAGGCAGTTTTCCGGGGAGAGTTTTCAGGGGGCGGTGACGGCTGCTACCGGAGGAGGGGACCAGCCGGTTTATATGATTCAGGCGCCGGGGACGTTCTATCACGCGCCGCCGGGTATGCGTCCGGCGACTCATGGGTACTACGCTGTGCAGCGAATGGGTTCTGAGGGTTACCGGGAACAGCCGGTGTATGGGGGTGTCCCACCTCCGAAAGCGGTGTTTTCGTCGGCGGGATCGGCGAGCTTGCAACCGCCCCAGCCGGTTAAGCCTTCGGGGTATGCGGAAGGATACGGCGTCGTTCGGTCAGCTGGGGTGCCGGATAATACGGGCGGTACTGCGTACGCGCAGGTGGCGTATGATAGTGCAAGTGGGAGACAGGTTTACTATACTGCGCCGCCAGGGGTTGTCCACGCGCCGCCGTACCAAGGTGTTTCTCCGATGATCGGTGCTGACGTAAGACAGGCCGGGGTTTCGATGGGCCAGGATGTTAAAGCGGTAAACAAGGTTTCCCAAGGATCTGTGTGA 1365 0.5538 MENYQYPSYPDSGDSSPRSREIDFENPTPWDEQQQPQNYKTKFLCSYGGKIQPRSHDNQLSYVGGDTKILAVDRNIKFPTFLSKLAALCDATPQELTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLFRPSTKPVRMRLFLFTGVSNPGPIPTQPDPLKPPSNVDFLFGLDKQVAPPPSHPTGVKFHDTIPEPVAPPTEYQTRGPVVDRVIGSDPNEIQRQMQRLQISENDQNLYRRRSEDGFSGGYSAAAGGEYYLQKVPEKVPPSNSQAGVQGHWQERQFSGESFQGAVTAATGGGDQPVYMIQAPGTFYHAPPGMRPATHGYYAVQRMGSEGYREQPVYGGVPPPKAVFSSAGSASLQPPQPVKPSGYAEGYGVVRSAGVPDNTGGTAYAQVAYDSASGRQVYYTAPPGVVHAPPYQGVSPMIGADVRQAGVSMGQDVKAVNKVSQGSV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01884 454 MobiDBLite consensus disorder prediction 1 15 - -
Rops2g01884 454 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Rops2g01884 454 Gene3D - 61 145 - -
Rops2g01884 454 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 146 - -
Rops2g01884 454 PANTHER OS05G0427100 PROTEIN-RELATED 9 386 - -
Rops2g01884 454 CDD PB1_UP2 44 144 - -
Rops2g01884 454 SUPERFAMILY CAD & PB1 domains 56 146 - -
Rops2g01884 454 MobiDBLite consensus disorder prediction 1 35 - -
Rops2g01884 454 SMART PB1_new 55 146 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01884 Rops-Chr2 29623015 29624537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01884 39 145 MAP Kinase Kinase Kinase AT5G57610 47.664 3.04e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01884 - - adu:107480527 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01884 2 29623015 29624537 Rops11g00351 11 4845402 4847050 PCT