Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01876 ATGAGACGAGGAAGGATTCCATATTTTTTTGGTAAATGTAGGCAACTGAAGGGCGAAGAACTTTCTGGTTTGGGTTTTAATGAGCTACGGGGTCTGGAAAATCATCTGGAGATGTGTTTGAAGAGCATTCGCACAAGAAAGGATCAAATTTTTAGTGATGAGATCAAAGAATTACACCAAAAGGAAAGCTTCAGTTGTCAAGAAAATGAAGAGCTTCATAAGAAGATAGACCTCATCCATAAGAAAAATGCAGAACTACAGCAGGTTATTGAAGCAAGGCGTACGGAAGAAGACAATTCAGCATCCAATCCTTCAAACTCTATCAGCTATGGATATGATATAGTTGAGGCAATCAGTCTCCAGCTAAGCAAGCCCCAACCACAATACAACGAACCACCTGCCCTCAAACTGATGATATAA 420 0.4 MRRGRIPYFFGKCRQLKGEELSGLGFNELRGLENHLEMCLKSIRTRKDQIFSDEIKELHQKESFSCQENEELHKKIDLIHKKNAELQQVIEARRTEEDNSASNPSNSISYGYDIVEAISLQLSKPQPQYNEPPALKLMI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01876 139 Coils Coil 69 89 - -
Rops2g01876 139 ProSiteProfiles K-box domain profile. 1 82 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops2g01876 139 Pfam K-box region 13 76 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01876 Rops-Chr2 29370082 29371285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01876 14 129 MADS-box Gene Family AT3G57230 40.171 1.65e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01876 K09264 - gmx:100808145 139.043