Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01829 ATGGATTATTGCACCTCATCTTTAAAATCTACAAATACTATACCTGGCTTTGCTTCAATCAAACGCACTTCCTTAAAATGGGCTCCAGACATAGCTCTCATAGTCTTTTCTGCAACGAGCAAGCTCTCTGAGTATGCTAGTTCAAGTATGCAACAAGTAATTGAAAGGCATAGTCGACATTCAGCAATTCATAGGTTGGACCACCCATCTATTGAGCTGCAGGTTGAGAATGACTCCAACGACACGCTGCGCAAGAAAGTAGAAGATAAGACTCGTGAACTGAGGCAGTTGAATGGGGAAGAACTGCAAGGATTGACATTACAAGACCTCCAGAAGCTAGAGGAACTCCTTAAAAGAAGTTTGACTAGTGTTTCAAAAGTAAAGGATGAAAAATTTATCCAAGACATCAACACCCTTAAGAGAAAGGGAGCGGATCTGATTGAAGTAAACCAAAGATTGAAACAGGTACCAAGCCTTGTACATGGACAAAGGCAATCACTGGAATGCATTATTAGCAGCAGTTCATCTTATCTTACTGAAGACCATGCCAGTGACACATCTCTTCAGTTGGGGTTACCTATACTTAAATAA 591 0.4061 MDYCTSSLKSTNTIPGFASIKRTSLKWAPDIALIVFSATSKLSEYASSSMQQVIERHSRHSAIHRLDHPSIELQVENDSNDTLRKKVEDKTRELRQLNGEELQGLTLQDLQKLEELLKRSLTSVSKVKDEKFIQDINTLKRKGADLIEVNQRLKQVPSLVHGQRQSLECIISSSSSYLTEDHASDTSLQLGLPILK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01829 196 Gene3D - 27 91 IPR036879 GO:0003677|GO:0046983
Rops2g01829 196 ProSiteProfiles K-box domain profile. 73 166 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops2g01829 196 Coils Coil 110 130 - -
Rops2g01829 196 PANTHER SERUM RESPONSE FACTOR HOMOLOG 30 145 - -
Rops2g01829 196 Coils Coil 73 100 - -
Rops2g01829 196 Pfam K-box region 81 155 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops2g01829 196 SUPERFAMILY SRF-like 30 70 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01829 Rops-Chr2 28382698 28391885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01829 17 193 MADS-box Gene Family AT2G22540 37.321 1.36e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01829 - - gmx:100812951 226.098