Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01818 ATGGAGGGTGGAAACAGACCCGAAGCGGAGCGGTGGCTCTTCACCGCGAACAAGCTTCTCAGCGCACGTGACTTGCACGGGGCACGTTCCTTCGCGATCCGTGCCCGAGAATCCGACCCGACTTTCGACGCTTCGGAGCTTCTTTTGACGGTTATCGACACACTCCTCGCCGGCGAGTCGCGAATCAACGACCACCACCGTGATTGGTACGGGATACTCCAGATTTTACGGTACACCACCAACATCGACCACATCGCCGCCCAGTATCGCCGCCTTGCCCTCCTCCTTGACCCTCACCGGAACCCTTTCGCCTTCTCTGGCCACGCTTTCTCCCTTGTCCATGACGCTTGGTCTGTTCTCTCCAACCCTGCCAAGAAGGCCATGTACGACAGCGACCTCCGATTGCTCACTACGCCGCCGCCGCAGCCTCAGCCTCAGCCGCAGCCCCCGCCACCGCAACCTCCTCAGCAGCAGTCTCAGCCTCCTCCGAGGAGAAACCCTAGATCGAGGGACAACGCGAGCGAGCCGACTCGGCAGAATCGGAACACGAGCGAGTCTACCGAGTCGACTCGGACGGCGAACGTTGACACGGATGGTGGCACGAGCTTCTGGACCTCGTGCCCTTACTGTTACGTTCTCTACGAGTACCCGAGGGTGTATGAGGATTGTACCCTCCGGTGCCAGAGTTGCCGGAGGGGGTTTCATGCGGTGGTGATACGGTCACCACCGTTGACGGGGAAAGATGGTTCCTTTTGCAGTTGGGGTTTTTTCCCGTTAGGGTTTTCTGGAAATTGCAAAGATATTAATGGGGTTTCTTCCAATTGGAACCCTTTTTCCCCTTTGTTTCCTTGCCCCTTGAAAGGTTCATCCTATAGGAAACCTCAGAGGAATTGGGCTTACTATGATGACGATGCCGCTGCGGCGTTTATCGAGCTTTCTGATCCAAGTGATGATGATTCTGGTGATGGGGATTGGAGGGGTGGTAATAAAAGGGGGAAGAAGAGGTCAAGGGTTGTTAGGAGGTATAGGAAAGATTCAGGTAATGCTAGTGGTGGTGATGTTAGGAGGGAAAACATAGAGAGACCTAGGAGGGGTGGTGCTGGTGCTAATGCTAATGCTGCAGGACATGGGAATGAAAATGTGGGTAATGGTGGGGCTGTTGATGCTGCTGCTGCTGCTTCTGGTGGTGGTGGTGGTGGTGCAAGGGCAGAGTCTAGTAAGAAAGCTGCATTGGGTGGTTCTAGAAGGAGGGGTGCAGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAAGAGCCTTCCCGTGGAGCGCGTGATCGTGAAGGGAATGCTACTGGAAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGTCTTGATGAGTTCCTCAATAGCTTACCCATTCTCAATGTTGTAGCAGATGATAAGGTTAAGGGTCATTAA 1464 0.5389 MEGGNRPEAERWLFTANKLLSARDLHGARSFAIRARESDPTFDASELLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIAAQYRRLALLLDPHRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLLTTPPPQPQPQPQPPPPQPPQQQSQPPPRRNPRSRDNASEPTRQNRNTSESTESTRTANVDTDGGTSFWTSCPYCYVLYEYPRVYEDCTLRCQSCRRGFHAVVIRSPPLTGKDGSFCSWGFFPLGFSGNCKDINGVSSNWNPFSPLFPCPLKGSSYRKPQRNWAYYDDDAAAAFIELSDPSDDDSGDGDWRGGNKRGKKRSRVVRRYRKDSGNASGGDVRRENIERPRRGGAGANANAAGHGNENVGNGGAVDAAAAASGGGGGGARAESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGARDREGNATGNAEDNIEGIGFFEGLDEFLNSLPILNVVADDKVKGH* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01818 487 Gene3D DnaJ domain 62 137 IPR036869 -
Rops2g01818 487 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 349 - -
Rops2g01818 487 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Rops2g01818 487 MobiDBLite consensus disorder prediction 134 197 - -
Rops2g01818 487 MobiDBLite consensus disorder prediction 138 162 - -
Rops2g01818 487 MobiDBLite consensus disorder prediction 312 456 - -
Rops2g01818 487 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Rops2g01818 487 SMART dnaj_3 67 125 IPR001623 -
Rops2g01818 487 CDD DnaJ 68 122 IPR001623 -
Rops2g01818 487 MobiDBLite consensus disorder prediction 176 197 - -
Rops2g01818 487 MobiDBLite consensus disorder prediction 430 451 - -
Rops2g01818 487 Pfam DnaJ domain 68 130 IPR001623 -
Rops2g01818 487 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Rops2g01818 487 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01818 Rops-Chr2 28090108 28091949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01818 8 486 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.331 1.21e-107 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01818 - - gmx:100811866 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01818 2 28090108 28091949 Rops11g00313 11 4173535 4174827 PCT