Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01795 ATGGATTTGCAAACTAACCCACAAGTTTTTATCTCATTTGAAGGTGATTCCATCAAGTCAATAGAAATCAGTGGAAGTGTTGAGGGAGAGAAGGAGGGCATTACATTGACATGGGAGGATTTGTGGGTCACTGTTTCCAATGGAAAGAAAAGGAAACCAATTCTTCAGGGTCTTACAGGTTATGCTCAGCCAGGAAGGCTTCTTGCTATAATGGGCCCTTCAGGTTGTGGAAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTAAGCTCAAACATAAAGCATACAGGAAATATTCTAATCAATGGCCACAAACAAGCACTAGCTTATGGAACATCTGGCTATGTAACACAAGATGATGCTATGCTGTCAACTTTAACTGCAGGGGAAACTTTATACTACTCAGCTCAGCTTCAATTTCCAGATTCCATGTCCATGACAGAGAAGAAGGAACAAGCTGATATCATACTCAGAGAAATGGGTTTGCAAGATGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGTGGACAAAAGAGGAGACTCAGCATTTGCATTGAGATTCTAACACGTCCAAGACTTCTATTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGGAGAATTGCAAGTCTAAATCTAAGAGATGGAATTAGAAGGACTATTGTTGTATCCATCCACCAGCCTAGCAGTGAAGTTTTTGAACTTTTCCATGACCTTTGTCTTCTGTCTTGTGGTGAAATGGTGTATTTTGGTCCAGCCTCTGATGCCAATGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAACTCTCCACAACCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTTGAACAGGATGCTGAAGAAGGCTTTGGTAAGGGAGCAACTACAGAAGAAGCAATTAGTGTCCTTGTAGAGTCTTATAGATTGTCTCAAATTAGAAACCAAGTTAAAAAGCTAGTTGCAAAAATAAGCGAAAGTGACTCCGGTGCAATAGGGAAGAAGAGGATCCATGCTGCATTCCTCACTCAATGCTTTGTTCTTATAAGAAGATCTTCTTTGCAATTGTTTCGTGACATAAGCAATTACTGGTTACGTTTAGCTGTCTTTATTGCAATAGCTATAAGCATTGGTTCTATCTTCTATGACCTTGGCTCAAGTAGTGCATCTATTCAGGGGAGAGGTTCGCTGCTCACTTTTCTTATTTCAGTTCTGAGTTTCATGACCCTTGTTGGTGGATTCTCTCCACTTTTGGAGGAAATGAAGGTATTTGAACGTGAGAGATTGAATGGGCACTATGGTGTTACAGCTTTCCTCATAGGCAACTTATTCTCTGCTGTTCCATTCATGCTAATTATCTCTCTGATTCCTGGTGGAATAGCTTACTCCCTTTGTGGCATGCACAAAGGACTGGGACACTTTCTGTACTTCAAATTTTTGCTATTTGCCATTGTGATGTGGGTTGAGAGCCTCATGTTGGTGGTTGGGAGTATCTCCCCCAATTTTATAATAGGCATGTTCATCACTGGTGGAATTGAAGGACTCATGATTTTAACAGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAACCATTATGGAGATACCCTTTTTACTATATTTCCTTCGTCAAGTATGCCATCCAAGGATCATTCAAGAATGAATTTGATGGCTTAACATTTTCAAAAGACCAAGATGGAGGAGGCAACAAAACCATCAGTGGTAAAGAAATATTGGCTGAGACATTGCATGTTGAAATGGATCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTGTTATGTATCGAGTGCTGTTTTTGGCCATCACTAAGAGCAAGGAGAAGCTGAAGCCTTTTCTTGCAGCCATAAGTGGTCCCCGTGCATAA 1938 0.4066 MDLQTNPQVFISFEGDSIKSIEISGSVEGEKEGITLTWEDLWVTVSNGKKRKPILQGLTGYAQPGRLLAIMGPSGCGKSTLLDALAGRLSSNIKHTGNILINGHKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSMTEKKEQADIILREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMRRIASLNLRDGIRRTIVVSIHQPSSEVFELFHDLCLLSCGEMVYFGPASDANEFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKGATTEEAISVLVESYRLSQIRNQVKKLVAKISESDSGAIGKKRIHAAFLTQCFVLIRRSSLQLFRDISNYWLRLAVFIAIAISIGSIFYDLGSSSASIQGRGSLLTFLISVLSFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNLFSAVPFMLIISLIPGGIAYSLCGMHKGLGHFLYFKFLLFAIVMWVESLMLVVGSISPNFIIGMFITGGIEGLMILTGGFYRLPNDLPKPLWRYPFYYISFVKYAIQGSFKNEFDGLTFSKDQDGGGNKTISGKEILAETLHVEMDHSKWVDLAIMFGMIVMYRVLFLAITKSKEKLKPFLAAISGPRA* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01795 645 FunFam ABC transporter G family member 11 34 321 - -
Rops2g01795 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 272 IPR027417 -
Rops2g01795 645 Pfam ABC-2 type transporter 357 570 IPR013525 GO:0016020|GO:0140359
Rops2g01795 645 Pfam ABC transporter 56 206 IPR003439 GO:0005524
Rops2g01795 645 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 638 - -
Rops2g01795 645 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Rops2g01795 645 Gene3D - 34 339 IPR027417 -
Rops2g01795 645 Pfam ABC-2 type transporter 238 301 IPR043926 GO:0140359
Rops2g01795 645 SMART AAA_5 64 257 IPR003593 GO:0016887
Rops2g01795 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 281 IPR003439 GO:0005524
Rops2g01795 645 CDD ABCG_EPDR 33 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01795 Rops-Chr2 27719575 27724222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01795 65 242 Calmodulin-binding Proteins AT2G36910 31.183 3.45e-10 61.6