Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01794 ATGGGAAGTTATCAGAGAGAAAAGCAAGACATTACTGTGACATGGGAGAATTTGGAGGCAACTGTTACAAATGGAAAGAATAGAAAACTAATTCTGCATGGACTTACAGGTTATGCACAACCAGGGAAGCTTTTGGCTGTAATGGGTCCTTCAGGTTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTGAAAGCAAACATAAAGCAATCTGGGAAGATTCTAATCAATGGCCACAAACAAGCACTGGCTTATGGAACATCTGGTTATGTAACACAAGATGATGCAATGCTGTCAACTTTAACAGCTGAGGAAACTTTATACTACTCAGCTCAGCTCCAGTTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACAAGCAGATATCATACTCAGAGAAATGGGTCTGCAAGATGCCGTTAACACAAAGGTTGGAGGGTTGGGTTCTAAAGGCCTCAGTGGGGGGCAAAAGAGGAGACTCAGCATTTGCATTGAGATTCTAACACGCCCAAGACTTCTCTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAAGTCTAAATCTAAGGAATGGCATTAGAAGGACTATTGCTGTATCCATCCACCAACCAAGCAGTGAAGTTTTTGAACTTTTTCATGACCTCTGTCTTCTATCTTCTGGTGAAACTGTATATTTTGGTCCAGCATCCGATGCAAATCAGTTTTTTGCTTCTAATGGTTTTCCTTGCCCAACTCTCTACAATCCTTCTGATCACTACTTGAGGATCATAAACAAAGATTTTGAACAGGATGCTGAAGAAAGCTTTGCTAAAGAAGAAGCAATTGATATCCTTGTAAATTCTTATAAATCGTCTGGAATTAGAAATCAAGTTCAGACTGAAGTGGCAAAAATAAGTGGAAGCGATTATGGTGGTACAGTGAGGAAGAAGAGGATCCACGCTGCGTTCCCCACTCAGTGCTTGGTTCTTATAAGAAGATCTTCCCTGCAATTTTATCGTGATATAAGCAATTACTGGTTACGCCTTGTCGTATTTATAGTAATAGCTATAAGCCTGGGCTCTATCTTCTTTCACATCAGTCCAACTGATGCATCCATTCAGGGCAGAGGATCGCTGCTTGCTTTTCTGATTTCAGTTCTGACTTTCATGACACTTGTGGGTGGATTCTCTCCGTTAATTGAGGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGCATCACTGCTTTTCTCATTGGCAACATATTCTCTTCCATTCCATACATGCTTATGATATCTCTTATTCCTGGAGCAATAGTTTATTACCTTTCTGGACTCCACAAAGGACTAGAACACTTTCTATACTTTGCTTCTGTCCTATTTGCTGTGGTGATGTGGGTTGAGAGCCTTATGATGGTGGTGGGTAGCATCTTCCCAAATTTTGTAATGGGAGTTATCATAGCTGGTTGCATTGAAGGACTCATGATTTTAACAGGTGGATTCTATAGACTTGCAAATGATCTTCCAAAACCATTATGGAAATACCCTTTCTACTATGTTTCTTTCCTCACCTATGCTTTCCAAGGAACATTCAAGAATGAATTTGAAGGCTTGAAATTTGTTTTGTATCATGATGGAGGTGCCAAAGTCATTAGTGGGAGAGAAATATTGGCTAAGACATGGCAGGTGCAAATGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTGTTGTGTATCGAGTTATGTTCTTGGTTATCACTAAGATCAAGGAGAAGTCGAAACTTGTTGTTGGTTCCATTAACAGTGTTCCCCAAACAAAGATTTTCTCTAGGACCAGCATTGATGAACACTAA 1893 0.4031 MGSYQREKQDITVTWENLEATVTNGKNRKLILHGLTGYAQPGKLLAVMGPSGCGKSTLLDALAGRLKANIKQSGKILINGHKQALAYGTSGYVTQDDAMLSTLTAEETLYYSAQLQFPDSMSIAEKKEQADIILREMGLQDAVNTKVGGLGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLRNGIRRTIAVSIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLYNPSDHYLRIINKDFEQDAEESFAKEEAIDILVNSYKSSGIRNQVQTEVAKISGSDYGGTVRKKRIHAAFPTQCLVLIRRSSLQFYRDISNYWLRLVVFIVIAISLGSIFFHISPTDASIQGRGSLLAFLISVLTFMTLVGGFSPLIEEMKVFERERLNGHYGITAFLIGNIFSSIPYMLMISLIPGAIVYYLSGLHKGLEHFLYFASVLFAVVMWVESLMMVVGSIFPNFVMGVIIAGCIEGLMILTGGFYRLANDLPKPLWKYPFYYVSFLTYAFQGTFKNEFEGLKFVLYHDGGAKVISGREILAKTWQVQMGHSKWVDLAIMFGMIVVYRVMFLVITKIKEKSKLVVGSINSVPQTKIFSRTSIDEH* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01794 630 SMART AAA_5 41 220 IPR003593 GO:0016887
Rops2g01794 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 613 - -
Rops2g01794 630 Pfam ABC-2 type transporter 331 544 IPR013525 GO:0016020|GO:0140359
Rops2g01794 630 Gene3D - 12 286 IPR027417 -
Rops2g01794 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Rops2g01794 630 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Rops2g01794 630 FunFam ABC transporter G family member 11 11 294 - -
Rops2g01794 630 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Rops2g01794 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 249 IPR027417 -
Rops2g01794 630 Pfam ABC-2 type transporter 215 313 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01794 Rops-Chr2 27707273 27713209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01794 31 219 Calmodulin-binding Proteins AT2G36910 32.143 5.46e-12 67.4