Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01793 ATGAGCACTCTTCTTGGTAGTGATTGCGAACCAAACAATGGCTCTAAAACTATGCCAACCAGCATGGAATTTGAGACCACATTGGAGGTGGAAGCCATGAAATCAGTAGAAAGTGGTGAAGTTGGTGAGGTAGATGAAGAGGAGGGTGTTTTCTTGACGTGGGAGGATCTGTGGGTGACAGTTTCAAATGGAAACAAAGGAAGAAAAGCAATACTAAAGGGTCTAAAAGGGTATGCAAAACCAGGACAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCTTTAGCAGGAAGATTAGGTTCAAAGACAAAGCAAACAGGGAAGATCCTAATCAATGGTCGCAAACAAGCACTAGCTTATGGAACATCAGCATATGTAACAGAAGATGATACTATTTTAAAAACTCTAACAGTTAGAGAAGCTGTATACTACTCAGCTCACCTCCAATTGCCAGATTCCATGTCCATGTCAGAGAAACAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTGCAAGATACCATTAACACCAGAATTGGAGGGTGGGGATCTAAAGGCATAAGTGGTGGACAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCCAGGCTTCTCTTCCTTGATGAACCCACTAGTGGACTTGATAGTGCAGCTTCTTATCATGTTATGAGTAGAATATCTAGCTTAAACAAAAAGGATGGCATTAAAAGGACTATTATTGCATCAATCCATCAACCAAGTAATGAAATTTTTCAACTTTTTCACAACCTTTGTCTTCTGTCTTCTGGGAAAACAGTTTACTTTGGACCTGTATCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCCTGCCCAAGTCTCCAGAGTCCTTCTGATCACTTCGTAAAAACCATAAACAAGGATTTTGAACAGGACCCTGAGAAAGGATTAGCTGGAGGACTAAGCACAGAAGAAGCGATTCATATTCTTGTTAAATCATATGATTCATCTGAAATTAGTCACCAAGTTCAAAAAGAAATAGCTGAAATAAAAAAAAGGGATTCGGGCACAATGGAGAAGAAAAGCCATGCTGACTTTTTAACGCAGTGCCTTATTCTTACAAGAAGATCTTTCGTGAATATGTATCGTGAAGTAGGCTATTACTGGTTACGCCTATTTATCTATGGTGCCTTGGCTTTAAGTCTTGGCACCATGTTCTTTGACATTGGTTCAAGCAGTGAATCAATTCAGGCCAGAGGTTCACTGCTTGTGTTTGTGGTTACATTCCTGACCTTCATAACTGTCGGTGGATTCCCTTCTTTTGTGGAGGATATGAAGGTGTTTGAACGAGAAAGACTTGATGGGCATTATGGTGTCACTGCATTTACCATTGGCAACACATTATCTGCTGTTCCATTCTTGCTATTGATGTCATTGATCCCAGGAGCACTGGTTTATTACCTAGTTGGACTTCACCAAGGACATGAACACTTTGTGTACTTTATATCTGTGCTTTTTATTTCTGTCTTCTTGGTTGAGGGTCTCATGATGATAGTTGCAAGTATGGTTCCCAATTTCCTGATGGGCATAATCTTTGGCACTGGAATCTTAGCCATAATGATGTTAGATGGTGGGTTCTATAGGCTGCCAAGTGATATCCCTAAGCCCTTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAATATGCCTACCAAGGATTGTTCAAGAATGAGTTTCAAGGCCTAACATTCACTACCAATCAAGTTGGGGGGCCTATGACTATCAGTGGTGAAGACATACTGAGACAATTATGGCAAATGGAAATGAATTACTCAAAGTGGGGAGAAGTTTCTATCTTGGTAGGAATGGCAATAGTATATCGAATTCTGTTTTTGGTTATCATCAAGAGCATTGAGAAGGTGAAGCCTATTGTTGCAGCAATTAATTGTCCCCAAAGGGATGATGATGAACCTGACATCCTCACAAATGAAGTCGGAAACCCTCTTGTTGGAGAAGATGTGCCTTTAGGGGGTGCGCTGGCCAGCCTTGAGAATCAATTTTCGACCCCAGATCTATCTTTTCGCACTAAGAGGGCCCAGATCTCTGAGAAAGGCAAAGAGAAGGTTACTTATGTAGAGGTGGACGATAACCTTGATGAGCTCGAAGCCCAATCTGAGGATCCAGATTTTCTTTGGGGTCAAGACTATGTTCCTCCACGTGTGACTTCTGTGATCCTGGTGCCCAATGATCTCTGA 2274 0.4134 MSTLLGSDCEPNNGSKTMPTSMEFETTLEVEAMKSVESGEVGEVDEEEGVFLTWEDLWVTVSNGNKGRKAILKGLKGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSKTKQTGKILINGRKQALAYGTSAYVTEDDTILKTLTVREAVYYSAHLQLPDSMSMSEKQERADFTIREMGLQDTINTRIGGWGSKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMSRISSLNKKDGIKRTIIASIHQPSNEIFQLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQSPSDHFVKTINKDFEQDPEKGLAGGLSTEEAIHILVKSYDSSEISHQVQKEIAEIKKRDSGTMEKKSHADFLTQCLILTRRSFVNMYREVGYYWLRLFIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEDMKVFERERLDGHYGVTAFTIGNTLSAVPFLLLMSLIPGALVYYLVGLHQGHEHFVYFISVLFISVFLVEGLMMIVASMVPNFLMGIIFGTGILAIMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFTTNQVGGPMTISGEDILRQLWQMEMNYSKWGEVSILVGMAIVYRILFLVIIKSIEKVKPIVAAINCPQRDDDEPDILTNEVGNPLVGEDVPLGGALASLENQFSTPDLSFRTKRAQISEKGKEKVTYVEVDDNLDELEAQSEDPDFLWGQDYVPPRVTSVILVPNDL* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01793 757 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 287 IPR027417 -
Rops2g01793 757 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 298 IPR003439 GO:0005524
Rops2g01793 757 FunFam ABC transporter G family member 11 50 338 - -
Rops2g01793 757 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Rops2g01793 757 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Rops2g01793 757 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 38 653 - -
Rops2g01793 757 SMART AAA_5 81 270 IPR003593 GO:0016887
Rops2g01793 757 Pfam ABC-2 type transporter 255 358 IPR043926 GO:0140359
Rops2g01793 757 CDD ABCG_EPDR 52 280 - -
Rops2g01793 757 Pfam ABC-2 type transporter 373 585 IPR013525 GO:0016020|GO:0140359
Rops2g01793 757 Gene3D - 46 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01793 Rops-Chr2 27686504 27699439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01793 71 280 Calmodulin-binding Proteins AT2G36910 26.636 9.82e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01793 K05681 - gmx:100789571 1145.57