Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01791 ATGGCTGCCCTTCTTCCACATGCTCCTAGTGACCATGAAACTAAACCGAGCTCAACATCAATACCCCACCAAACTGTCCTAGACATCGAAGCCACCAAACCAGAGATGGAACCATTAAGTACTATCCATGAAGGTTGGAATCTTGAGAGAGAAGATAAAGGTATCATCTTGACATGGAAGGATCTATCGGTGACTGCTTCAATGGGAAAGCATGGAAGCAGATCAATTCTTGAGGGTCTTACTGGTTATGCCAAGCCAGGGCAACTCTTGGCCATAATGGGTCCTTCTGGTTCTGGAAAATCTACACTTCTTGATGCTTTAGCAGGAAGATTAAGTTCAAATACAAGACAATCAGGGGAAATTCTGATCAATGGCAACAAACAACAATTGGCTTACGGAACCTCGGCATATGTTACACAAGATGATACCTTATTGACAACCTTAACGGTTAGAGAAGCAGTGCACTACTCAGCTCAACTTCAATTGCCTGATTCCACGTCCAAGGAAGAGAAGAAAGAGAGAGCAGACTTTACAATAAGAGAAATGGGTCTGCAATATGTCGTTAACACAAGAATTGGAGGAGGGTGGGGTTCTAAAGGCATTAGTGGTGGTCAGAGAAGGCGAGTGAGCATCTGTATCGAGATCTTATCACGTCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTGGACAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCTGCCTTGGATAAAAAAGATGGCATTCAGAGGACTATTATTGCATCGATCCATCAACCTAGCACTGAAGTTTTTCAACTTTTCCACAACCTTTGTCTACTATCTTTAGGTAGAATAGTTTACTTTGGACCTGCTTCTGCTGCATGTGAGTTTTTCGCTTCAAATGGTTTTCCTTGTCCTACCCTCCAAAATCCATCTGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATATTAAGGTGGGTTTAGCAGGGACTGGAACAACATCCACAGAGGAAGCAATCCGTATTCTCATGAGCTCATATAAATCATCTGAATGGAATCAAGATGTTCAAAATGAAGTAGCATTCTCTGAAAAGCACACCAATTCAATAGACAAAAAGAGAAGGCATGCGGGCTTCCTTAATCAATGCTTAGTTCTTATCAAACGATCTTCTGTGAATATGTGTCGTGATCTTGGTTATTACTGGTTACGCCTTGCCATATATATTGCATTGGCTATTAGTTTAGCCACTGTCTTCTATGATTTGGATACAAGTAATCGCTCAATTCAGGATAGAGGTTCATTTCTCATGTTTGTCTCTTCATTCATGACTTTCATGAGCATTGGTGGATTCCCTTCCTTTGTAGAGGACATGAAGGTATTTGAACTCGAAAGACTAAATGGGCATTATGGTGTTACTGCATATGTTATTGGGAACACCTTTTCAGCTATCCCATACTTATTGCTAGTTTCAATAATTCCTGGAGCTGTAGCTTATTACTTTCCTGGTCTTCAGAAAGGATTTGAGCATTTTTTGTATTTTATTTGTGTTCTATTTGCTTGTCTAAAGTTAGTAGAGAGCCTTATGATGATAGTTGCTAGCTTAGTCCCCAACTTTCTAATGGGTATCATAACAGGTGCTGGAATTCAAGGAATCATGATTTTAGGTGGTGGGTTCTTTAGATTACCAAATGATCTTCCTAAGCCATTTTGGAGATACCCCTTGTTCTATGTTGCCTTCCATAGGTATGCCTACCAAGGATTGTTCAAAAATGAGTTTGAAGGGCTAAACTTTGCTACAAATGAAGTTGGTGGTGGTGGCTCAACCAATTACATTAGTGGTGAAGAAATTCTAAGAAATAAATGGCAAGTAGAAATGAGTTACTCCAAGTGGGTTGATCTTGGAATCTTGCTGGCAATGATTGTTCTATATCGAGTTCTATTTTTGGTTATCAACAAAACTACTGAGAAGCTAAAGCCCATTGTTGTATCATTCATGTCAGCGTCTCCCAAGTAA 2016 0.3973 MAALLPHAPSDHETKPSSTSIPHQTVLDIEATKPEMEPLSTIHEGWNLEREDKGIILTWKDLSVTASMGKHGSRSILEGLTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLSSNTRQSGEILINGNKQQLAYGTSAYVTQDDTLLTTLTVREAVHYSAQLQLPDSTSKEEKKERADFTIREMGLQYVVNTRIGGGWGSKGISGGQRRRVSICIEILSRPKLLFLDEPTSGLDSAASYYVMKRIAALDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSLGRIVYFGPASAACEFFASNGFPCPTLQNPSDHLLKTINKDFDQDIKVGLAGTGTTSTEEAIRILMSSYKSSEWNQDVQNEVAFSEKHTNSIDKKRRHAGFLNQCLVLIKRSSVNMCRDLGYYWLRLAIYIALAISLATVFYDLDTSNRSIQDRGSFLMFVSSFMTFMSIGGFPSFVEDMKVFELERLNGHYGVTAYVIGNTFSAIPYLLLVSIIPGAVAYYFPGLQKGFEHFLYFICVLFACLKLVESLMMIVASLVPNFLMGIITGAGIQGIMILGGGFFRLPNDLPKPFWRYPLFYVAFHRYAYQGLFKNEFEGLNFATNEVGGGGSTNYISGEEILRNKWQVEMSYSKWVDLGILLAMIVLYRVLFLVINKTTEKLKPIVVSFMSASPK* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01791 671 CDD ABCG_EPDR 54 286 - -
Rops2g01791 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 295 IPR027417 -
Rops2g01791 671 SMART AAA_5 86 276 IPR003593 GO:0016887
Rops2g01791 671 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524|GO:0016887
Rops2g01791 671 Pfam ABC-2 type transporter 261 316 IPR043926 GO:0140359
Rops2g01791 671 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Rops2g01791 671 Gene3D - 46 299 IPR027417 -
Rops2g01791 671 MobiDBLite consensus disorder prediction 1 23 - -
Rops2g01791 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 48 664 - -
Rops2g01791 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 304 IPR003439 GO:0005524
Rops2g01791 671 Pfam ABC-2 type transporter 382 593 IPR013525 GO:0016020|GO:0140359
Rops2g01791 671 FunFam ABC transporter G family member 11 55 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01791 Rops-Chr2 27614042 27618907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01791 76 289 Calmodulin-binding Proteins AT2G36910 27.477 7.17e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01791 K05681 - gmx:100813462 1014.22