Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01781 ATGAATCTCCTCCTTCACGATCATGATCATCCACCAGTTCAATATAATGCCACTTACAATGAACCAGATAATAGTCCAAGTATGGTGCAATCTAATAACCATGAGTTTGTTACCACAATTGAGGAGGAAGCCATCATAAAGTCCAAAGAAAGAAATAAAAGTACTCAGACAGAGGAGGAGGAGGAGGAGGGCATCTTCCTAAGTTGGGAGGATTTGCAGGTGACTGTTCCAAATGGAAGGAGCCATAGGAAACCAATTCTAAAGTGTCTAACTGGCTATGCCAAGCCAGGGCAGCTCCTGGCAATAATGGGTCCTTCTGGCTGTGGCAAGTCCACACTTCTTGATGCTCTAGCAGGAAGATTGGGTTCAGGCATAAAGCAAACAGGGGAGATTCTAATCAATGGCCACAGACAAGCACTGGCTTATGGCACATCAGCATATGTAACACATCATGATGCTGTGTTATCAACATTAACAGTTGGAGAAGCAGTGTACTACTCAGCTCAGTTCCAATTTCCAGACTCAATGTCCAATAAAGAGAAGAAAGAGAGAGCGGAGTTTACAATCAGACAAATGGGTCTACAAGATGCCACTAACACAAGGATTGGAGGGTGGGGTCATAAAGGCCTTAGTGAGGGGCAAAAGAGAAGACTTTGCATTTGCATTGAGATTCTTACAAGCCCAAAACTTTTCCTTCTTGATGAACCAACTAGTGGCCTAGACAGTGCAGCTTCCTACTATGTAATGAGTAGAATTGCAAGTCTAAAGATAAGAGATGGCATCAAAAGGACTATTGTTGTATCCATTCATCAGCCTAGTAGTGAAATCTTTGAACTCTTCCATAATCTTTGTCTTCTGTCTTCAGGTGAAACAGTATACTTTGGCCCCACTTCTGCTGCAAATGAGTTTTTTGCTTCAAATGACTTCCCTTGTCCACCTCTCCACAACCCTGCTGATCATTTCTTAAGGATCATAAACAAGGATTTCAAACTGGATGATGAAGAATGCTTCCATATAGCAGTTTCCAAAGAAGAAGCAGTTGATATCCTTATTAAGTTTTATAAATCTTCTGAAATTAATAACCAAGTTCAGAAAGAAGTGGCAGCAATAAGTGAAAGAGAATATGGTTTTGTGGAGAGGAACAGAACCCAAGCTGCATTTCTTAATCAATGTAATTTTCTTATAAGAAGATCTTCAGTCCACTTGTTTCGTGATGTAACCAATTACTGGTTACGTGTAGCTATCTTTGTTGGAGCAGCTATTAGTCTAGGCACTATTTTCTTTGACGTTGGTGCAAGTAATGGATCTATTCAGGCTAGAGGGGCATTGGTCTCTTTTGTTGCTTCAGTCCTGACTTTCATTACCCTTCTTGGTGGATTCCCTCCATTTGTGGAACAAATGAAGGTATTTCAACGTGAGAGATTGAATGGACATTATGGTGTTGGTGCTTTTGTGATTAGCCAGACACTATCTCCTATTCCGTATGTGATACTGATGTCACTGATTCCTGGAGTGGTTGCTTACTACCTTTCTGGACTTCACACAGGTCTTGAACGATTGCTATACTTTTCATCTGTGCTATTTGCTTGTATAATGTGGGTTGAAAGCCTCATGTTGGTTGTTGCAAGTATCTTCTCCAATCCCAACATGGGCATCACAATATGTGGTGGTGTTGTGGGACTCATGATTTTAACTGGTGGATTCTTTCGTTTGCCAAATGATCTTCCCAAACCATTTTGGAAATACCCTATGTACTATGTTTCTTTCCACAATTATGCCTTTCAAGGATTGTTCAAGAATGAGTTTATTGGTTTGAAGTTGGCTAGAGATCAAGATGGAGGTACTTACATTAGTGATAAAGAAATACTCACAAAGATATGGCAAGTGGAAATGAATCACTCAAAGTGGGTTGATCTTGCTATCATGATGGGAATTATTGTTTTGTATAGACTTATATTCTTAGTAATCACTAAGAGCAAGGAGAAGATGAAGGCTTGA 1998 0.4014 MNLLLHDHDHPPVQYNATYNEPDNSPSMVQSNNHEFVTTIEEEAIIKSKERNKSTQTEEEEEEGIFLSWEDLQVTVPNGRSHRKPILKCLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSGIKQTGEILINGHRQALAYGTSAYVTHHDAVLSTLTVGEAVYYSAQFQFPDSMSNKEKKERAEFTIRQMGLQDATNTRIGGWGHKGLSEGQKRRLCICIEILTSPKLFLLDEPTSGLDSAASYYVMSRIASLKIRDGIKRTIVVSIHQPSSEIFELFHNLCLLSSGETVYFGPTSAANEFFASNDFPCPPLHNPADHFLRIINKDFKLDDEECFHIAVSKEEAVDILIKFYKSSEINNQVQKEVAAISEREYGFVERNRTQAAFLNQCNFLIRRSSVHLFRDVTNYWLRVAIFVGAAISLGTIFFDVGASNGSIQARGALVSFVASVLTFITLLGGFPPFVEQMKVFQRERLNGHYGVGAFVISQTLSPIPYVILMSLIPGVVAYYLSGLHTGLERLLYFSSVLFACIMWVESLMLVVASIFSNPNMGITICGGVVGLMILTGGFFRLPNDLPKPFWKYPMYYVSFHNYAFQGLFKNEFIGLKLARDQDGGTYISDKEILTKIWQVEMNHSKWVDLAIMMGIIVLYRLIFLVITKSKEKMKA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01781 665 Pfam ABC-2 type transporter 270 335 IPR043926 GO:0140359
Rops2g01781 665 Pfam ABC-2 type transporter 390 602 IPR013525 GO:0016020|GO:0140359
Rops2g01781 665 SMART AAA_5 96 285 IPR003593 GO:0016887
Rops2g01781 665 FunFam ABC transporter G family member 11 65 353 - -
Rops2g01781 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 302 IPR027417 -
Rops2g01781 665 Gene3D - 52 308 IPR027417 -
Rops2g01781 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 313 IPR003439 GO:0005524
Rops2g01781 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 53 664 - -
Rops2g01781 665 Pfam ABC transporter 91 238 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01781 Rops-Chr2 27444179 27448381 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01781 50 274 Calmodulin-binding Proteins AT2G36910 24.790 6.67e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01781 K05681 - gmx:100784793 1090.49