Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01777 ATGAAGGATGGCGGAGGAGGAGACGAAGAAGATGAAGAGTTCGGACCATTGTTGAACTTTGAAGCTGTTATGAAAGAAGCAGAATCTCGTGGTGTTAAGTTACCTTCAGATATGGTAGAGGCAGCGAGGATCACTGGCATTCGTGAAATGTTTCTTCTTCGTTACTTGGAATTACAAGGTTCGGCTTGGCCATTGTCTTTTCTGATGAAGCATTGTTCTATGTTGAGAAATCGAATGCTAGCAGACCCTTCTATGTTGAGGGCACAGAGATTTCCCAAGACCCGTGATCTTATCATCCTTGTCTGGCTATGGGTTTTCTTTCTTTTAACAAAAATGTCATTTGTCTACTGCAGAGCAATAGCTCATGGAGCTTGCTTGAAAAATGGAGAAGAAGCACCCAATGAAAATCGCCAGAGAGAATTGGCTGATGAATTAAGAGCTAAGGTTGTAGACGAACTGTTGAAAAGACGTGAGGAAACAGAATGTGACCTCAGTTCCAATCAATTGAATGAATCAATTCCTCCGAATAAGCCCTTAAATGATAAATTCCACAATTTTGCTCTCCTAACTAGATGTGAATTTGGGAGTGTCAAAAATGGAGCAAACTGTAATGTGACTATTCACATAGAATTGCATGATCCAGATGCATTGTTCTCTTCAAGAGTATGTTCGATCGACACCTCTTCAAAATCAGGGATAGGTACAGGTGCACTAGTCGGCATAATCTTAGGGTCAATTGCTTGTGCAGTGGCATTGTCCGTGATTTTTACTCTTCTTATAGTAAGAACACAATTGAGAACATCATGCAGTTTCCAGACGACGTCATGATCTTTTACTTATGGAGAATTGTGCTCCGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTACGGGAAGGTTTATAAAGGTATTCTTTCTGATGGCACAGTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAAAAGGAGTTCCTAACAGAAATATCATTACTATCAAGGTTACATCATCGTAACCTTGTGTCTCTGATCGGATACTGTGATGAAGAAGGTGAACAGAGATCTTTGGTTTATGAATTTATGTCAAATGGCACACTAAGGGATCACCTTTACGATCTTTGTGTGAATATTCCTTTGTTCTATCCGGCTCCAATCAAGTGCAATGATATCTCGGATAGTTTGTTTTACAATAGTTGTGTGCCTAAGTGCCTTTCTCGTACTCTCTCTCTTAAGGGTGTGCTTAATGTTTTGCCACGATTACATCAAAAGAACCTCGACGTTTGCCATGAGGTTGAAAATTGCACTAGGGTCACTAAAGGTCTTACGTATCTACACACGCGTCAACAGGAAGCAGAGTTGAGATTAATAGCAGAAGAGACTGCAAAGAGGATTGAAGAAGCAATTCGTAAGAGAGTCGAAGAAAGCTTGAATTCTGAGGAGGTTCAGTCGGAGATTCAAAGGAGGTTGGAAGAGGGACGAAAGAGACTTAACGATGAAGTTGCAGCTCAACTTGAAAAAGAAAAAGAAGCTGCTCTTATTGAGGCTAGACAGAAGGAGGAACAAGCTCGTAAAGAGAAAGTGGAACTTGAAAGAATTCTTGAGGAGAACCGGAGGAAGATTGAAGAAGCTCAGAGACTGGAAGCTTTAGAGTAG 1671 0.4123 MKDGGGGDEEDEEFGPLLNFEAVMKEAESRGVKLPSDMVEAARITGIREMFLLRYLELQGSAWPLSFLMKHCSMLRNRMLADPSMLRAQRFPKTRDLIILVWLWVFFLLTKMSFVYCRAIAHGACLKNGEEAPNENRQRELADELRAKVVDELLKRREETECDLSSNQLNESIPPNKPLNDKFHNFALLTRCEFGSVKNGANCNVTIHIELHDPDALFSSRVCSIDTSSKSGIGTGALVGIILGSIACAVALSVIFTLLIVRTQLRTSCSFQTTS*SFTYGELCSATNNFSNSAQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQRSLVYEFMSNGTLRDHLYDLCVNIPLFYPAPIKCNDISDSLFYNSCVPKCLSRTLSLKGVLNVLPRLHQKNLDVCHEVENCTRVTKGLTYLHTRQQEAELRLIAEETAKRIEEAIRKRVEESLNSEEVQSEIQRRLEEGRKRLNDEVAAQLEKEKEAALIEARQKEEQARKEKVELERILEENRRKIEEAQRLEALE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01777 555 ProSiteProfiles Protein kinase domain profile. 289 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01777 555 Gene3D Phosphorylase Kinase; domain 1 260 365 - -
Rops2g01777 555 SUPERFAMILY Protein kinase-like (PK-like) 262 451 IPR011009 -
Rops2g01777 555 Pfam Protein tyrosine and serine/threonine kinase 292 453 IPR001245 GO:0004672|GO:0006468
Rops2g01777 555 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Rops2g01777 555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 229 459 - -
Rops2g01777 555 FunFam receptor-like serine/threonine-protein kinase NCRK 264 365 - -
Rops2g01777 555 Pfam Arginine and glutamate-rich 1 454 553 IPR033371 -
Rops2g01777 555 Coils Coil 491 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01777 Rops-Chr2 27391065 27397518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01777 211 375 Receptor kinase-like Gene Family AT5G37450 44.792 7.35e-42 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops2g01777 PK_Tyr_Ser-Thr 5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01777 - - gmx:100786467 212.616