Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01771 ATGGATAGTCTCTGTTGCTTCAACTCTGTCAGTCAGGTGGTCGGAGGGCGTTCTTCATGTAACTCTGGCAAAGGCAAGAGCAGTCAGTCCCCTGTTAAGTATGGCTTTAGCCTTGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCACGTGGCAAAATTTGTCCACTTCAAAGGGCAAGAGCTAGGACTTTTTGCTATATATGACGGACACCTGGGAGACAGTGTACCAGCATATTTACAAAAGCATCTCTTTTCTAATATCTTGAAAGAAGAGGACTTCTGGAATGATACATTCATGTCCATTTGTAAAGCTTATGAGATAACAGATCAGGCAATTCTTTCTCACAGTCCTGACTTGGGGCGAGGAGGATCAACTGCTGTGACTGCAATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTCGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGAGGCTGTACAGATGACTACTGATCATGAACCCAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTATCAAACATGCCAGGAGATGTTGCTAGAGTGAATGGCCAACTTGCAGTTTCTCGAGCATTCGGAGACAAAAACCTCAAAACACACTTGCGATCCGATCCTGACATTCAGTATGCTGATATTGACCCTGAAATTGAGCTCTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAAAATAAAGGATCCACAAAGGGCAGCCAAACAACTAGCCACTGAGGCATTGAACAGAGACAGTAAGGATGACATTTCCTGCATTGTAGTTCGTTTCAAGGGATGA 849 0.4405 MDSLCCFNSVSQVVGGRSSCNSGKGKSSQSPVKYGFSLVKGKANHPMEDYHVAKFVHFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWNDTFMSICKAYEITDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGEAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADIDPEIELLILASDGLWKVMANQEAVDIARKIKDPQRAAKQLATEALNRDSKDDISCIVVRFKG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01771 282 CDD PP2Cc 32 280 IPR001932 -
Rops2g01771 282 SMART PP2C_4 29 278 IPR001932 -
Rops2g01771 282 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Rops2g01771 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Rops2g01771 282 PANTHER PROTEIN PHOSPHATASE 28 280 IPR015655 GO:0004722|GO:0006470
Rops2g01771 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Rops2g01771 282 FunFam Probable protein phosphatase 2C 39 24 281 - -
Rops2g01771 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Rops2g01771 282 Gene3D - 17 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01771 Rops-Chr2 27320022 27328838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01771 1 281 PP2C-type Phosphatase Gene Family AT1G22280 71.777 1.48e-149 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01771 2 27320022 27328838 Rops2g01771 2 27320022 27328838 ECH
Rops2g01771 2 27320022 27328838 Rops11g00272 11 3727973 3732360 PCT