Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01761 ATGGACTCTGCGTTCTCCGTCACCACGACGGCGCAGATGGTTCTTTTCCGTGCACTCCACCGCCATTTCACCGGAACTCCTCATCTCGCGCTCCTCCGCCGTAACAACCTCAAATGTGTGGTTGCTTCTTACAGCAACTGCTTCCGCATTCCTTGCTGCTCCGCCTCTTTCACTTCTGCGCCGTTGTCTTCCTCGCTCCGCAACTTCCGTGTTCTGCTTCCGCGAACGCCGTGCCGTGCGCGCTGCGTTTCGAGCTCCGCCGCTTCGTTTGCTTCTTCTGGCGACGGTGGAAATGGCGGCGCTGGTGCCGGTTACGGCGGAGGAGGCGACGGTTCTGGCGGTGAGTCTGGAGATGCTAAACTCAAATTGGTTGGAGACTCAGCTCAGGAGGTTTCGCCTCTTTCGCCTGATGTTATCATTCTCGATGTTTCGGGAATGGTGTGCGGAGGATGTGCAGCAAATGTGAAAAGGATTCTAGAAAGTCGACCACAAGTGTCATCTGCTAGTGTAAATTTAACAACAGAGACAGCAATAGTTTGGCCTGTATCCGAAGCAAAAACTGCACCAAATTGGCGAAAGCAATTAGGGGAGACACTTGCAGAGCATTTAACTAGCTGTGGTTATCATTCTAGCCTTCGAGATTCAACACGAGAAAGTTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGGCAAAGACAATTAAGCGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTCTGTGCTGTCTGTCTTGTTGGCCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGCATCCATGCATTGCATTCCGTTGGGTTTCATCTATCCTTGTCTTTGTTTACGTTACTTGGTCCTGGCCGGCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAGGGCACCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTGTCATCATTTGCAGTCAGTTCATTTGCTGTCTTGCTGCCAAAATTGGGTTGGAAGGCTTTTTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGGAAGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTATATTGCCCTCAAAAGCTCGCCTTCTAGTTAACAATGGGGAAACAGAGGTTGTCTCAATTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGAAGACCAAATTATTGTATTACCTGGGGACCGTATTCCAGCTGATGGAATTGTGAGAGCTGGTAGAAGCTCTGTAGATGAGTCAAGTTTCACTGGGGAGCCGCTGCCAGTAACAAAAATACCTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTAAATGGAACTCTCACAATGGAAGTGCAGAGACCTGGTGGTGAGACTGCTATTGGAGATATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAACGGTTGGCTGACAAGGTGGCAGGATACTTCACTTATGGGGTGATGGCAGTCTCTGTTACCACATTTACGTTTTGGAGTCTGTTTGGCTCACACATTTTACCTGCTGCTGTTTATCAAGGAAGTTCAGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTGTGGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACGGCTGTGCTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGCAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACGGTTGGTAGACCTGTTGTGACAAAGATTGTCACACCTACATGCATAGACAATGCAAATTCAAGCCAAACTAAACAAAATGCTCTGTCTGATATTGAAGTTCTGAGGTTAGCAGCTGCTGTAGAATCAAATTCATTACATCCAGTTGGGAAAGCAATTGTGGACGCTGCTCAGGCAGTTAATTGTCATGATGCTAAGGCAGCAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCAGTGGCAACCATTGATAACAAAAAGGTTTCTGTTGGGACATTGGAATGGATTACCAGGCATGGAGTTAACAACAGCATACATCCAGAAGTGGAGTGTAAAAACCAATCCTTTGTCTATGTTGGAGTTAATGATACTCTAGCTGGCCTAATTTATTTTGAAGATGAGATAAGAGAAGATGCAAGATATGTTGTTGACACATTGTCTAAGCAAGATATTGGTGTATACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAGTATGTCGCTTCTCTTGTTGGGATTTCCAAAGAGAAGGTGCTATCTGAAGTGAAACCAGATGAGAAAAAGAAGTTCATAAATGAACTACAGAAAGATAAGAACATTGTAGCTATGGTTGGTGATGGAATTAATGATGCAGCTGCTCTGGCTTCCTCACATATTGGTATTGCATTAGGTGGGGGTGTAGGAGCTGCCAGTGAGGTGTCTTCTATCATATTGATGCGCAACCAACTCTCACAGCTACTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAACAAAATCTTTGGTGGGCTTTCGTATACAACATTGTAGGGATTCCTATTGCTGCTGGAGTGTTATTTCCTATAAATGGTATTATGCTGACTCCATCAATCGCTGGGGCTCTCATGGGGTTTAGTTCCATTGGCGTAATGACTAACTCATTACTTTTGAGATTCAAATTTTCCTCAAAGCAGAAACAAATACATGGCACGTTGTCAAAGACCAAAATCCATATGGATTCTGATAACCAGAAAATATAG 2814 0.4492 MDSAFSVTTTAQMVLFRALHRHFTGTPHLALLRRNNLKCVVASYSNCFRIPCCSASFTSAPLSSSLRNFRVLLPRTPCRARCVSSSAASFASSGDGGNGGAGAGYGGGGDGSGGESGDAKLKLVGDSAQEVSPLSPDVIILDVSGMVCGGCAANVKRILESRPQVSSASVNLTTETAIVWPVSEAKTAPNWRKQLGETLAEHLTSCGYHSSLRDSTRESFLQIFERKMEERQRQLSESGRELAVSWALCAVCLVGHFSHFFAAKAPCIHALHSVGFHLSLSLFTLLGPGRQLILDGLKSLLKRAPNMNTLVGLGALSSFAVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGKNLEQRAKIKATSDMTGLLSILPSKARLLVNNGETEVVSIVEVPSDSLSVEDQIIVLPGDRIPADGIVRAGRSSVDESSFTGEPLPVTKIPGSEVAAGSINLNGTLTMEVQRPGGETAIGDIVRLVEEAQSREAPVQRLADKVAGYFTYGVMAVSVTTFTFWSLFGSHILPAAVYQGSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMANTVVFDKTGTLTVGRPVVTKIVTPTCIDNANSSQTKQNALSDIEVLRLAAAVESNSLHPVGKAIVDAAQAVNCHDAKAADGTFLEEPGSGAVATIDNKKVSVGTLEWITRHGVNNSIHPEVECKNQSFVYVGVNDTLAGLIYFEDEIREDARYVVDTLSKQDIGVYMLSGDKRNAAEYVASLVGISKEKVLSEVKPDEKKKFINELQKDKNIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIILMRNQLSQLLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGVLFPINGIMLTPSIAGALMGFSSIGVMTNSLLLRFKFSSKQKQIHGTLSKTKIHMDSDNQKI* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01761 937 ProSiteProfiles Heavy-metal-associated domain profile. 137 211 IPR006121 GO:0046872
Rops2g01761 937 FunFam Copper-transporting ATPase 1, putative 358 480 - -
Rops2g01761 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 598 730 - -
Rops2g01761 937 Pfam haloacid dehalogenase-like hydrolase 584 811 - -
Rops2g01761 937 Gene3D - 138 215 - -
Rops2g01761 937 NCBIfam HAD-IC family P-type ATPase 630 883 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g01761 937 NCBIfam HAD-IC family P-type ATPase 377 607 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g01761 937 CDD P-type_ATPase_Cu-like 240 910 - -
Rops2g01761 937 ProSitePatterns Heavy-metal-associated domain. 143 172 IPR017969 GO:0046872
Rops2g01761 937 SUPERFAMILY HAD-like 585 906 IPR036412 -
Rops2g01761 937 Gene3D - 598 730 IPR023299 GO:0000166
Rops2g01761 937 PRINTS Copper-transporting ATPase signature 872 886 - -
Rops2g01761 937 PRINTS Copper-transporting ATPase signature 340 359 - -
Rops2g01761 937 PRINTS Copper-transporting ATPase signature 776 793 - -
Rops2g01761 937 PRINTS Copper-transporting ATPase signature 292 311 - -
Rops2g01761 937 PRINTS Copper-transporting ATPase signature 499 513 - -
Rops2g01761 937 FunFam Copper-transporting ATPase PAA1, chloroplastic 137 212 - -
Rops2g01761 937 Gene3D - 357 480 - -
Rops2g01761 937 Coils Coil 221 241 - -
Rops2g01761 937 ProSitePatterns E1-E2 ATPases phosphorylation site. 589 595 IPR018303 -
Rops2g01761 937 SUPERFAMILY HMA, heavy metal-associated domain 139 211 IPR036163 GO:0046872
Rops2g01761 937 Pfam Heavy-metal-associated domain 141 209 IPR006121 GO:0046872
Rops2g01761 937 SUPERFAMILY Calcium ATPase, transduction domain A 390 476 IPR008250 -
Rops2g01761 937 NCBIfam heavy metal translocating P-type ATPase 307 908 IPR027256 GO:0006812|GO:0016020|GO:0019829
Rops2g01761 937 SUPERFAMILY Calcium ATPase, transmembrane domain M 339 885 IPR023298 -
Rops2g01761 937 Pfam E1-E2 ATPase 371 567 - -
Rops2g01761 937 SFLD C1.7: P-type atpase like 570 849 - -
Rops2g01761 937 SFLD p-type atpase 570 849 IPR044492 -
Rops2g01761 937 Gene3D - 579 849 IPR023214 -
Rops2g01761 937 PANTHER ATP7, ISOFORM B 132 910 - -
Rops2g01761 937 CDD HMA 141 211 IPR006121 GO:0046872
Rops2g01761 937 NCBIfam copper-translocating P-type ATPase 289 909 - -
Rops2g01761 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 715 866 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 744 754 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 799 818 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 722 733 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Rops2g01761 937 PRINTS P-type cation-transporting ATPase superfamily signature 587 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01761 Rops-Chr2 27061626 27088288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01761 289 929 Primary Pumps ATPases AT1G63440 38.110 8.56e-126 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01761 K17686 - gmx:100796210 1483.77