Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01758 ATGTCTCACTTCGGAAGGTCAGGTCCACCAGACATCTCCGACACCTACTCTCTCCTCGTACTCAACATCACTTTCCGTACAACCGCCGATGACCTATTCCCGCTGTTTGATAAGTATGGGAAAGTCGTTGACATCTTCATCCCAAAAGATCGAAGGACTGGTGAGTCGAGGGGTTTCGCGTTTGTGCGTTACAAGTATGCCGATGAGGCTCAAAAGGCTGTTGAGAGGCTCGATGGAAGAATGGTTGATGGTCGTGAAATAACTGTACAGTTTGCAAAATACGGGCCTAATGCTGAGAGGATTCACAAAGGGAGGATTATTGAAACATCTCCAAGATCAAAGGGGTCAAGGAGCCGCAGTCCCAAGAAAAGGTCTCGTGATGATTACAGAGATAGGGACCACAGGAGGAGAAGCCGCAGCCGAAGTTATGATAGGTATGAACGTGACAGGTACCGTGGGAGAGACAGGGACTATCGTCGTCGAAGCAGGAGCCGTAGTGCCAGTCCTGATTACAAGCGTCGTGGAAGGGGACGATATGATGATGAGGGTCGTAGCAGAAGCCGGAGCAGATCAGTTGATAGTCGCTCCCCTGTACGACGCAGTCCTAGTCCTCGAAGGAGTCCTTCCCCTAAAAGGAGTATTTCCCCTCAAAGGAGTCCTTCCCCCAGGAAAAGTCCACGGGGTGAAAGTCCTGAGAATCGTAGCCGTGATGGACGGTCTCATACACCTCGCAGTGCCTCACCACGTGATCGCCGTGATGCTTCACGAAGCCCATCCCCTCGAAATTCCAATGGTGATGAATAA 804 0.5112 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSKGSRSRSPKKRSRDDYRDRDHRRRSRSRSYDRYERDRYRGRDRDYRRRSRSRSASPDYKRRGRGRYDDEGRSRSRSRSVDSRSPVRRSPSPRRSPSPKRSISPQRSPSPRKSPRGESPENRSRDGRSHTPRSASPRDRRDASRSPSPRNSNGDE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01758 267 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Rops2g01758 267 Gene3D - 4 103 IPR012677 -
Rops2g01758 267 MobiDBLite consensus disorder prediction 196 224 - -
Rops2g01758 267 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Rops2g01758 267 SMART rrm2_1 17 90 IPR003954 GO:0003676
Rops2g01758 267 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
Rops2g01758 267 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
Rops2g01758 267 MobiDBLite consensus disorder prediction 100 267 - -
Rops2g01758 267 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 257 - -
Rops2g01758 267 CDD RRM_SRSF2_SRSF8 18 90 - -
Rops2g01758 267 MobiDBLite consensus disorder prediction 225 257 - -
Rops2g01758 267 SMART rrm1_1 17 90 IPR000504 GO:0003723
Rops2g01758 267 MobiDBLite consensus disorder prediction 121 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01758 Rops-Chr2 27011477 27016023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01758 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.000 1.23e-09 56.2